Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_005887.1
Length=42415
Score E
Sequences producing significant alignments: (Bits) Value
seq429 183 8e-42
>seq429
Length=112147
Score = 183 bits (202), Expect = 8e-42
Identities = 227/311 (73%), Gaps = 0/311 (0%)
Strand=Plus/Minus
Query 26126 CGTTTCATGGCGTCGAGCAGGATGTCCTGCACGGCGCGCTTCGTTTCGCGGCGCTCGACG 26185
|| ||||| || || | | ||||||||||| ||||| | ||||| ||||| | |
Sbjct 10715 CGCTTCATCGCCTCTAATAAAATGTCCTGCACCTGACGCTTTGAGTCGCGTCGCTCCATG 10656
Query 26186 ACGTCCTCGTCGATCGTGTCGCGCGCGATGATCGGGTAGATGAAAACGGGGCGGCGGTGG 26245
|| || |||| || ||| |||| || ||| ||||| || ||||| ||||
Sbjct 10655 ACCAGTTCATCGACGGTATCGGTGGCGACAATGTGGTGAATGAATACCGGGCGCGGGTGC 10596
Query 26246 CCGGCCTGCAGCTGGCGCACGGGTCCGATCCGCTCGACGATCTGCAGGTATTCCTCGAGG 26305
|||||||| ||| || || ||||| ||||||| |||||| |||| | ||| |||
Sbjct 10595 CCGGCCTGAGCCTGTCGGGTCGGGCCGATGCGCTCGATAATCTGCTGGTACTGCTCAAGG 10536
Query 26306 TTCCACCAGTGGCCGAAGACCGCAAGGATGTTGCCGCCGTCCTGCAGGTTCAGGCCGTGG 26365
|||||||||| ||| | | | |||| || ||||||||||| |||||||| |||||
Sbjct 10535 CCCCACCAGTGGGAGAAAAACACCAGGACATTACCGCCGTCCTGAAGGTTCAGCCCGTGC 10476
Query 26366 CCGGCGCTGGCCGGGTGCGCGAACATCACCGGGATCTTGCCAGCGTTCCAGTCGCGGATC 26425
||||||||||| ||||| ||||||| | ||| ||| || ||||||||||||| |||
Sbjct 10475 CCGGCGCTGGCGGGGTGGGCGAACAGTAGCGGTATCCGTCCGGCGTTCCAGTCGCTGATT 10416
Query 26426 GTCTGCGGGTT 26436
|| ||||| ||
Sbjct 10415 GTATGCGGATT 10405
Score = 127 bits (140), Expect = 6e-25
Identities = 109/135 (81%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 30152 GAACGCCCGTGCATATGCAAGCTTGTACAAGTCGGCGCCGATGCCGGCGTCGAAGTCGCG 30211
||||||| || || || |||||||||| ||| ||||||| ||||||||| | |||||
Sbjct 2536 GAACGCCTTGGCGTAGGCCAGCTTGTACAGGTCATCGCCGATACCGGCGTCGTAATCGCG 2477
Query 30212 GAACGCCTGCAGCTTCCACTTCTCGCCGGCCAGCCACGCCGCGTCGCGGCCTTCGATGTT 30271
||| |||||||||||||| | |||||| |||||||||||| | ||||||||||| ||
Sbjct 2476 GAATGCCTGCAGCTTCCATTCCTCGCCCGCCAGCCACGCCAGCACCCGGCCTTCGATATT 2417
Query 30272 CGACAGGTCGGACAC 30286
||||||||| ||
Sbjct 2416 GCTCAGGTCGGATAC 2402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 135603620577324
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |