Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_005887.1 Length=42415 Score E Sequences producing significant alignments: (Bits) Value seq429 183 8e-42 >seq429 Length=112147 Score = 183 bits (202), Expect = 8e-42 Identities = 227/311 (73%), Gaps = 0/311 (0%) Strand=Plus/Minus Query 26126 CGTTTCATGGCGTCGAGCAGGATGTCCTGCACGGCGCGCTTCGTTTCGCGGCGCTCGACG 26185 || ||||| || || | | ||||||||||| ||||| | ||||| ||||| | | Sbjct 10715 CGCTTCATCGCCTCTAATAAAATGTCCTGCACCTGACGCTTTGAGTCGCGTCGCTCCATG 10656 Query 26186 ACGTCCTCGTCGATCGTGTCGCGCGCGATGATCGGGTAGATGAAAACGGGGCGGCGGTGG 26245 || || |||| || ||| |||| || ||| ||||| || ||||| |||| Sbjct 10655 ACCAGTTCATCGACGGTATCGGTGGCGACAATGTGGTGAATGAATACCGGGCGCGGGTGC 10596 Query 26246 CCGGCCTGCAGCTGGCGCACGGGTCCGATCCGCTCGACGATCTGCAGGTATTCCTCGAGG 26305 |||||||| ||| || || ||||| ||||||| |||||| |||| | ||| ||| Sbjct 10595 CCGGCCTGAGCCTGTCGGGTCGGGCCGATGCGCTCGATAATCTGCTGGTACTGCTCAAGG 10536 Query 26306 TTCCACCAGTGGCCGAAGACCGCAAGGATGTTGCCGCCGTCCTGCAGGTTCAGGCCGTGG 26365 |||||||||| ||| | | | |||| || ||||||||||| |||||||| ||||| Sbjct 10535 CCCCACCAGTGGGAGAAAAACACCAGGACATTACCGCCGTCCTGAAGGTTCAGCCCGTGC 10476 Query 26366 CCGGCGCTGGCCGGGTGCGCGAACATCACCGGGATCTTGCCAGCGTTCCAGTCGCGGATC 26425 ||||||||||| ||||| ||||||| | ||| ||| || ||||||||||||| ||| Sbjct 10475 CCGGCGCTGGCGGGGTGGGCGAACAGTAGCGGTATCCGTCCGGCGTTCCAGTCGCTGATT 10416 Query 26426 GTCTGCGGGTT 26436 || ||||| || Sbjct 10415 GTATGCGGATT 10405 Score = 127 bits (140), Expect = 6e-25 Identities = 109/135 (81%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 30152 GAACGCCCGTGCATATGCAAGCTTGTACAAGTCGGCGCCGATGCCGGCGTCGAAGTCGCG 30211 ||||||| || || || |||||||||| ||| ||||||| ||||||||| | ||||| Sbjct 2536 GAACGCCTTGGCGTAGGCCAGCTTGTACAGGTCATCGCCGATACCGGCGTCGTAATCGCG 2477 Query 30212 GAACGCCTGCAGCTTCCACTTCTCGCCGGCCAGCCACGCCGCGTCGCGGCCTTCGATGTT 30271 ||| |||||||||||||| | |||||| |||||||||||| | ||||||||||| || Sbjct 2476 GAATGCCTGCAGCTTCCATTCCTCGCCCGCCAGCCACGCCAGCACCCGGCCTTCGATATT 2417 Query 30272 CGACAGGTCGGACAC 30286 ||||||||| || Sbjct 2416 GCTCAGGTCGGATAC 2402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135603620577324