Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq283 87.8 1e-12 >seq283 Length=328914 Score = 87.8 bits (96), Expect = 1e-12 Identities = 180/265 (68%), Gaps = 2/265 (1%) Strand=Plus/Plus Query 3875 GGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATGCAA 3934 || || ||| || | ||||| ||||| || || || ||||| | || || ||||| || Sbjct 107406 GGCGTTCATATTGTCATGGCAGACGGCGGATTTTCAGTTGAAAGACAGGAGAATATTCAG 107465 Query 3935 GAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGATCATACGA 3994 ||||| || || ||| | | || |||| || |||||| | | |||| || | || Sbjct 107466 GAAATTTTGTCAAAACAACTTTACCTGTGCCAGTGTTTATTGGGCTTGAAAATATTGAGA 107525 Query 3995 ATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTGGTTTA 4054 || |||| ||| ||||||||| ||||| ||||| ||||||| | ||| | Sbjct 107526 CCAAAAGGACATTTTGTGTGCAAATTTTTTGATATTTTTACCGCTTTTAGCGTCGGTCTT 107585 Query 4055 GTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACATT-CATCGCG 4113 | ||||| ||||| | | ||| | || | ||| |||| ||| | || | || Sbjct 107586 ATATATTTAATGTACAATTGCTTTGAGAAAATATCAATTGTCAAGCCAAACAGCAGC-CG 107644 Query 4114 ACCGGCCAATTCTGAAAGATATTTG 4138 || |||||||| |||||||||||| Sbjct 107645 TCCCGCCAATTCGGAAAGATATTTG 107669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276547782522178