Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_005905.1
Length=86462
Score E
Sequences producing significant alignments: (Bits) Value
seq283 87.8 1e-12
>seq283
Length=328914
Score = 87.8 bits (96), Expect = 1e-12
Identities = 180/265 (68%), Gaps = 2/265 (1%)
Strand=Plus/Plus
Query 3875 GGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATGCAA 3934
|| || ||| || | ||||| ||||| || || || ||||| | || || ||||| ||
Sbjct 107406 GGCGTTCATATTGTCATGGCAGACGGCGGATTTTCAGTTGAAAGACAGGAGAATATTCAG 107465
Query 3935 GAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGATCATACGA 3994
||||| || || ||| | | || |||| || |||||| | | |||| || | ||
Sbjct 107466 GAAATTTTGTCAAAACAACTTTACCTGTGCCAGTGTTTATTGGGCTTGAAAATATTGAGA 107525
Query 3995 ATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTGGTTTA 4054
|| |||| ||| ||||||||| ||||| ||||| ||||||| | ||| |
Sbjct 107526 CCAAAAGGACATTTTGTGTGCAAATTTTTTGATATTTTTACCGCTTTTAGCGTCGGTCTT 107585
Query 4055 GTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACATT-CATCGCG 4113
| ||||| ||||| | | ||| | || | ||| |||| ||| | || | ||
Sbjct 107586 ATATATTTAATGTACAATTGCTTTGAGAAAATATCAATTGTCAAGCCAAACAGCAGC-CG 107644
Query 4114 ACCGGCCAATTCTGAAAGATATTTG 4138
|| |||||||| ||||||||||||
Sbjct 107645 TCCCGCCAATTCGGAAAGATATTTG 107669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 276547782522178
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |