Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_006949.1 Length=46900 Score E Sequences producing significant alignments: (Bits) Value seq748 109 2e-19 >seq748 Length=7821 Score = 109 bits (120), Expect = 2e-19 Identities = 234/349 (67%), Gaps = 8/349 (2%) Strand=Plus/Minus Query 32903 CCAAGCATTTGCATGGTTCCACTAACGCCAACGATGACTTCGGTAGTGAACCGATTCTGT 32962 |||||||||||||| | ||| ||| || || || | ||| || | | || || Sbjct 7287 CCAAGCATTTGCATAGAACCATTAATTCCTACAATAATTTCTGTGATATATTTATCTTGA 7228 Query 32963 CCACTTTGGTCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCAGAGCCT 33022 ||| ||||||| ||||||||||| ||| |||| | ||||||| ||| || | ||||||| Sbjct 7227 CCATTTTGGTCTTGCCATTTTCTAGTCTGCAAGCTTCCTTCAATATATACTTGAGAGCCT 7168 Query 33023 TTTCGCAGATACTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATCACCACACGGTGCCAC 33082 ||||| | ||| || | ||| |||||||| | ||| || | || | | |||||| Sbjct 7167 TTTCGTAAATATTCTCCGGCTATTTCTGCTAATTTTCCAAATAAAACTATTCTGTGCCAT 7108 Query 33083 TCCGTCTGCTCCTTTTGCTCGCCAGTATTTTTATCTCGCCATTGTTCTGACGTAGCTATT 33142 || || | || || || || |||||||| || ||||| || || ||||| | Sbjct 7107 TCAGTTTTTTCTTTCATGTCTCCGGTATTTTTGTCACGCCAGCTCTCAGATGTAGCAAGC 7048 Query 33143 GTCAGGTTAGCGAACGCTGTTCCTGATGGTGAGTATCTAAC----TTCCGGGTCTTGTCC 33198 || | || || | || |||| | | |||| |||| || || | ||| || Sbjct 7047 GTGATATTCGCAACAGCACTTCC----GTTAGGTATATAACGTATATCTGGATTTTGCCC 6992 Query 33199 AACCCGACAAAGGATAATCACCTTATTTACGCCTCTGCTTGCCATTTAT 33247 | | | || | ||| || |||||||| |||||||| | |||| || Sbjct 6991 TAAATGTCCAATTAAAATTACTTTATTTACACCTCTGCTAGTCATTGAT 6943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149955326415144