Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_006949.1
Length=46900
Score E
Sequences producing significant alignments: (Bits) Value
seq748 109 2e-19
>seq748
Length=7821
Score = 109 bits (120), Expect = 2e-19
Identities = 234/349 (67%), Gaps = 8/349 (2%)
Strand=Plus/Minus
Query 32903 CCAAGCATTTGCATGGTTCCACTAACGCCAACGATGACTTCGGTAGTGAACCGATTCTGT 32962
|||||||||||||| | ||| ||| || || || | ||| || | | || ||
Sbjct 7287 CCAAGCATTTGCATAGAACCATTAATTCCTACAATAATTTCTGTGATATATTTATCTTGA 7228
Query 32963 CCACTTTGGTCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCAGAGCCT 33022
||| ||||||| ||||||||||| ||| |||| | ||||||| ||| || | |||||||
Sbjct 7227 CCATTTTGGTCTTGCCATTTTCTAGTCTGCAAGCTTCCTTCAATATATACTTGAGAGCCT 7168
Query 33023 TTTCGCAGATACTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATCACCACACGGTGCCAC 33082
||||| | ||| || | ||| |||||||| | ||| || | || | | ||||||
Sbjct 7167 TTTCGTAAATATTCTCCGGCTATTTCTGCTAATTTTCCAAATAAAACTATTCTGTGCCAT 7108
Query 33083 TCCGTCTGCTCCTTTTGCTCGCCAGTATTTTTATCTCGCCATTGTTCTGACGTAGCTATT 33142
|| || | || || || || |||||||| || ||||| || || ||||| |
Sbjct 7107 TCAGTTTTTTCTTTCATGTCTCCGGTATTTTTGTCACGCCAGCTCTCAGATGTAGCAAGC 7048
Query 33143 GTCAGGTTAGCGAACGCTGTTCCTGATGGTGAGTATCTAAC----TTCCGGGTCTTGTCC 33198
|| | || || | || |||| | | |||| |||| || || | ||| ||
Sbjct 7047 GTGATATTCGCAACAGCACTTCC----GTTAGGTATATAACGTATATCTGGATTTTGCCC 6992
Query 33199 AACCCGACAAAGGATAATCACCTTATTTACGCCTCTGCTTGCCATTTAT 33247
| | | || | ||| || |||||||| |||||||| | |||| ||
Sbjct 6991 TAAATGTCCAATTAAAATTACTTTATTTACACCTCTGCTAGTCATTGAT 6943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 149955326415144
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |