Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq36 107 2e-18
seq32 89.7 5e-13
seq21 87.8 2e-12
>seq36
Length=1779304
Score = 107 bits (118), Expect = 2e-18
Identities = 159/223 (71%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 71642 TATAGTTTATTGCAATTCGAGCATAATCAAACGCATGATGAACTATGGAATGCTGCTCAG 71701
||||| ||| | |||||||||| || || |||||||| |||||||| | || ||
Sbjct 1521862 TATAGCTTAGAGGAATTCGAGCAGGCTCGTACCCATGATGATTTATGGAATTCAGCCCAA 1521803
Query 71702 CGACAGCT-ACGCAATGAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAA 71760
| || | | |||| ||||||||||| ||||| | | || ||||| ||||| |||||
Sbjct 1521802 CTGCAATTGATGCAA-GAGGGTAAAATGCACGGCTTTTTGCGTATGTATTGGGCTAAAAA 1521744
Query 71761 GATTCTCGAGTGGACTCAAACTCCCGAGCAGGCGCTCGAGTATTCTATTTATCTAAACGA 71820
|||| | || ||| || ||| || || | || | || ||| | |||||| ||
Sbjct 1521743 GATTTTAGAATGGTCTAAAAGCCCTGAAGACGCTTTGGAAATTTCGCTACTTCTAAATGA 1521684
Query 71821 TAGATACAGTCTCGACGGTCGCGATCCTAACGGTTATGTCGGT 71863
|||||||||| | || || ||||| || ||||||||||||
Sbjct 1521683 TAGATACAGTTTGGATGGCACGGATCCCAATGGTTATGTCGGT 1521641
>seq32
Length=1919080
Score = 89.7 bits (98), Expect = 5e-13
Identities = 150/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
||| ||||| | ||||||||||| |||| || || | ||||| | || | ||| |
Sbjct 39423 CAATATGCAGATTTTTGTAAAAACCCTAACGGGCAAGACCATCACTCTTGAGGTCGAACC 39364
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
||||| ||||| | || ||| |||||| |||||||| || || || |||||
Sbjct 39363 CTCGGACACTATCGAAAATGTAAAAGCCAAGATTCAGGACAAAGAGGGAATTCCACCCGA 39304
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944
|| ||| || | |||| || || || ||| | ||||||| | | | ||| ||
Sbjct 39303 CCAGCAACGATTGATTTTCGCTGGAAAGCAATTGGAAGATGGCCGCACATTGTCCGATTA 39244
Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981
||| |||||||||||||| || | ||||| || |||
Sbjct 39243 TAATATTCAAAAAGAATCCACCTTACATCTTGTGCTG 39207
>seq21
Length=2241434
Score = 87.8 bits (96), Expect = 2e-12
Identities = 107/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 115195 AAAGGCTTGCACGGATTTCATGTTCACGAATTCGGCGACACGAGCAACGGCTGCACGTCT 115254
|| || || || || |||||||||||||||||||| |||| | ||||||||||| |||
Sbjct 1381692 AAGGGATTACATGGTTTTCATGTTCACGAATTCGGGGACAATACTAACGGCTGCACTTCT 1381751
Query 115255 GCAGGCGAGCATTTTAACCCTACGAACATGGCTCACGGTGCGCCCAACTCTGCCGTTCGT 115314
|| || | ||||||||| ||| || | | || || || |||| || | |||
Sbjct 1381752 GCCGGTGCGCATTTTAATCCTTGCAATAAAGAGCATGGAGCACCCACTGATGATGAACGT 1381811
Query 115315 CACGTCGGTGATCTTGGCAATATTGA 115340
|| |||||||| | |||||| ||||
Sbjct 1381812 CATATCGGTGATTTGGGCAATGTTGA 1381837
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478652072858720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |