Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq26 107 5e-18
>seq26
Length=2133956
Score = 107 bits (118), Expect = 5e-18
Identities = 392/603 (65%), Gaps = 8/603 (1%)
Strand=Plus/Plus
Query 111360 GAAGAACTTCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCA-AAAAA 111418
||||| ||||| |||||||| |||| || || |||| || | || ||| | |||||
Sbjct 713005 GAAGAGCTTCTCTGGTTTATAAGCGGCAGCACCGATGCGAAAGTCCTA-CAGAACAAAAA 713063
Query 111419 TGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCA-GTTGGTCTTGTCG 111477
| | || ||| |||| || | ||||| ||||| ||| | | ||| || |
Sbjct 713064 CATTCACATCTGGAATGGTAACGCTAGTCGTGAATTTCTGGATAGATGCGGGTTCAGT-G 713122
Query 111478 ACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAG 111537
| ||||||||| || | || ||| ||||||| |||||||||||||| ||||| |||
Sbjct 713123 ATCGCGAAGAAGGCGACTTGGGGCCAATTTACGGTTTTCAATGGCGCCATTTTGGGGCAC 713182
Query 111538 ACTACAAAACCATGCACGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTCA 111597
| || || | ||| | |||| | | ||||| |||||||| || | | |
Sbjct 713183 AATATCGTACTTGTCGCGATACTTATGGTACGGAGGGAGTCGATCAATTGAAGCAGATAA 713242
Query 111598 TTGATCAAATTAAGAAC-AACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCA 111656
|| | | | ||| || || || || ||| || || ||| || | |||||||||
Sbjct 713243 TT-AGGACAATAACTACAAATCCTACAGATCGGCGTATGATTTTGTCCTCTTGGAACCCA 713301
Query 111657 AATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACAC 111716
| | ||||||||| | ||||| || ||| || |||||| |||||| |
Sbjct 713302 GTAGATATACCAAAAATGGCCTTACCACCCTGCCATTGCTTGGCCCAGTTCTATGTAGCC 713361
Query 111717 GACGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCG 111776
| ||| ||||| ||| | |||||||| ||| ||||| || || ||||| ||
Sbjct 713362 AATAATGAGCTGTCATGTCAACTTTATCAGCGCAGTGCCGATATGGGGCTGGGTGTCCCA 713421
Query 111777 TTTAATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCATTTTACAAATCTCAAA 111836
|||||||| ||| || ||| || | || | | || || ||| | || || |||
Sbjct 713422 TTTAATATAGCATCGTATGCATTATTAACGTCTATGATTGCACATCTAACCGGCCTAAAA 713481
Query 111837 CCGGGTGAATTCATTCACGTTATCGGAGATGCGCATGTTTACACAAACCACATTGATGCA 111896
|| || || || | ||| || ||| ||| |||| |||| | || || || | ||
Sbjct 713482 CCAGGCGATTTTGTACACACTACCGGCGATACGCACATTTATAAAACGCATATCCAACCA 713541
Query 111897 CTTAAAACACAGTTGAAGCGCAAACCATACGATTTCCCAACGATTCATATCAATAACATG 111956
| ||| || || | |||||||| | | ||||| | ||| ||| || ||| ||
Sbjct 713542 TTGAAAGAGCAATTAACACGCAAACCGCATGCATTCCCTA-AATTGATAATAA-AACGTG 713599
Query 111957 CCG 111959
|||
Sbjct 713600 CCG 713602
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303324777149732
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |