Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_007804.2
Length=39104
Score E
Sequences producing significant alignments: (Bits) Value
seq1715 111 4e-20
seq429 95.1 3e-15
>seq1715
Length=1042
Score = 111 bits (122), Expect = 4e-20
Identities = 179/255 (70%), Gaps = 2/255 (1%)
Strand=Plus/Minus
Query 19066 GTTGATGACGTAGTGAAGATTGCT-CAGGGCATACCGTTAAATGCTGTGGAAGGGAAGAA 19124
|||||||||| | || | || | ||||| || ||| | || || || || || |||
Sbjct 1042 GTTGATGACGCCATTAA-ACTGTTGCAGGGTATCCCGCTCAACGCGGTCGAGGGTAAGCC 984
Query 19125 TGAGCAGACTGGTGGTGATCTGGTTAAGCTGGGGAAAGGTCTGATGCCAGGTGCGAATCT 19184
|| || || || || ||||| || ||| | | || || |||| ||||| ||| |
Sbjct 983 GGAACAAACCGGGGGCGATCTCGTCAAGTTTGCCAAGGGCATGATCCCAGGGCAAAATTT 924
Query 19185 CTGGTACTTAAAGGCGGCTCTCGATCACATGATCTTTAACCAGATGCAGGAGTATTTTTC 19244
||||| || |||| || || || ||| ||||||| ||| | ||||| |||||
Sbjct 923 ATGGTATACCAAAGCGGTGCTTGACCATATGGTCTTTAATCAGCTACAGGAAATCTTTTC 864
Query 19245 ACCAGGTTATTTGCGTAAAATGGAGCAACGTTCGAAGAAAGAGTTTAACCAGACATACTG 19304
||| || ||||| || |||||| | ||||| |||||||||||| || || |||||
Sbjct 863 ACCGGGGTATTTACGCCGAATGGAAAAGCGTTCCCGGAAAGAGTTTAATCAAACCTACTG 804
Query 19305 GTGGCGACCACAGGA 19319
|||||| || |||||
Sbjct 803 GTGGCGTCCGCAGGA 789
>seq429
Length=112147
Score = 95.1 bits (104), Expect = 3e-15
Identities = 154/209 (74%), Gaps = 11/209 (5%)
Strand=Plus/Minus
Query 20279 TTGGTGGTGAACTGTGCAGGGTTGGCGTAACCGGCTAA-AAGGACCCGGCGCACCTTTCG 20337
||||||| || ||| |||||||| ||||||||| |||||||||||| |||| ||
Sbjct 6407 TTGGTGGCGAGCTGAACAGGGTTGAGACTACCGGCTAAGAAGGACCCGGCGAGCCTTGCG 6348
Query 20338 GTGCCCCCACACAGCCCACCATAATACGAATGTGACCGTGCTATACGCATaaaaaaa--C 20395
| |||||| ||||||||||| || | || || || || |||||||||||||
Sbjct 6347 GCTCCCCCATCCAGCCCACCATTATTCTGATATG-GCGGACT-GACGCATAAAAAAAACA 6290
Query 20396 CGCTTGCGCGGTG-AATGCGCCTT-TTAG-TAACCCGGGACGCCAATCCCGGCACTGGAT 20452
|||| || ||| ||||||||| |||| ||||| ||| | ||| |||| ||| ||
Sbjct 6289 CGCTCTCGGCGTGTTATGCGCCTTCTTAGATAACCGGGGTC-TCAAACCCGACACCTGAA 6231
Query 20453 TTTGCCAGTGCCCGATT-ACTATGGCACA 20480
||||| ||| | |||| ||||| || ||
Sbjct 6230 TTTGCAGGTG-CGGATTGACTATAGCGCA 6203
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 125008637739192
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |