Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq116 87.8 1e-12 >seq116 Length=862150 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 |||||| | || |||| ||||| ||||| || ||||| || ||||||||||| | Sbjct 484313 ACCTCCGCGGAGACGCAACACCAAGTGAAGAGTAGATTCCTTTTGTATGTTGTAATCAGA 484254 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 |||| || | || ||||| || ||||| ||||| |||| |||||||| || || Sbjct 484253 CAATGTGCGGCCATCTTCCAACTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAGG 484194 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCGC 34078 | | || |||||| | ||||||||| | | || | | | || | | ||| Sbjct 484193 AATACCTTCCTTGTCC-TGGATTTTTGCTTTAACGTTTTCGATAGTGTCTGACGGTTCTA 484135 Query 34079 ATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 ||| | || || ||||||||||| | ||||| ||||| ||||||||| Sbjct 484134 CTTCCAAAGTGATCGTTTTTCCGGTCAAAGTTTTAACAAATATTTGCATT 484085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397054047544252