Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_011357.1 Length=62147 Score E Sequences producing significant alignments: (Bits) Value seq985 102 3e-17 seq429 91.5 6e-14 >seq985 Length=1952 Score = 102 bits (112), Expect = 3e-17 Identities = 64/69 (93%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 24380 GGCCCTTTAGCTCAGTGGTGAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTTCAAAT 24439 ||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||| Sbjct 1752 GGCCCTTTAGCTCAGTGGTAAGAGCAGGCGACTCATAATCGCTTGGTCGCTGGTTCAAAT 1811 Query 24440 CCAGCAAGG 24448 ||||||||| Sbjct 1812 CCAGCAAGG 1820 >seq429 Length=112147 Score = 91.5 bits (100), Expect = 6e-14 Identities = 149/208 (72%), Gaps = 10/208 (5%) Strand=Plus/Plus Query 20521 GCAAAATCTGGCGTCGGGATTGGCGTCCTG--GATAGAGACCGCGACAGAT--ACACGCC 20576 ||||| || || | ||||||| |||||||| | || ||||||||||| ||||||| Sbjct 107488 GCAAATTCAGGTGCCGGGATTCGCGTCCTGCCGGAAGTAACCGCGACAGAATGACACGCC 107547 Query 20577 GCGAGCGTGTTTTTTATTGTCGTATGCACGCGCACATCTGAATTATGGTGGGCTGTGTGG 20636 |||||||||| |||| ||||| | | || |||||| | ||||||||||| ||| Sbjct 107548 GCGAGCGTGTCTTTTTATGTCGCAATCTAGC-TACATCTCA---ATGGTGGGCTGGATGG 107603 Query 20637 GGGCGGAGAGATCCGCGCCGGTCGGTTTCCCGGTTACGCCAACCCTGCACAGTTCACCA- 20695 || | || | | | ||||| |||| | | | ||||| ||| | | ||| || ||| Sbjct 107604 TGGAGCCGAAAGGCTCACCGGTTGGTTACTCCGGTACGCGAACTCCGTCCAGCTCGCCAC 107663 Query 20696 CCAGACGATTGGCGTCGT-CGGTGGTGA 20722 || |||| ||||| | ||||||||| Sbjct 107664 CCTCTAGATTCGCGTCTTACGGTGGTGA 107691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198741419262088