Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_011357.1
Length=62147
Score E
Sequences producing significant alignments: (Bits) Value
seq985 102 3e-17
seq429 91.5 6e-14
>seq985
Length=1952
Score = 102 bits (112), Expect = 3e-17
Identities = 64/69 (93%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 24380 GGCCCTTTAGCTCAGTGGTGAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTTCAAAT 24439
||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct 1752 GGCCCTTTAGCTCAGTGGTAAGAGCAGGCGACTCATAATCGCTTGGTCGCTGGTTCAAAT 1811
Query 24440 CCAGCAAGG 24448
|||||||||
Sbjct 1812 CCAGCAAGG 1820
>seq429
Length=112147
Score = 91.5 bits (100), Expect = 6e-14
Identities = 149/208 (72%), Gaps = 10/208 (5%)
Strand=Plus/Plus
Query 20521 GCAAAATCTGGCGTCGGGATTGGCGTCCTG--GATAGAGACCGCGACAGAT--ACACGCC 20576
||||| || || | ||||||| |||||||| | || ||||||||||| |||||||
Sbjct 107488 GCAAATTCAGGTGCCGGGATTCGCGTCCTGCCGGAAGTAACCGCGACAGAATGACACGCC 107547
Query 20577 GCGAGCGTGTTTTTTATTGTCGTATGCACGCGCACATCTGAATTATGGTGGGCTGTGTGG 20636
|||||||||| |||| ||||| | | || |||||| | ||||||||||| |||
Sbjct 107548 GCGAGCGTGTCTTTTTATGTCGCAATCTAGC-TACATCTCA---ATGGTGGGCTGGATGG 107603
Query 20637 GGGCGGAGAGATCCGCGCCGGTCGGTTTCCCGGTTACGCCAACCCTGCACAGTTCACCA- 20695
|| | || | | | ||||| |||| | | | ||||| ||| | | ||| || |||
Sbjct 107604 TGGAGCCGAAAGGCTCACCGGTTGGTTACTCCGGTACGCGAACTCCGTCCAGCTCGCCAC 107663
Query 20696 CCAGACGATTGGCGTCGT-CGGTGGTGA 20722
|| |||| ||||| | |||||||||
Sbjct 107664 CCTCTAGATTCGCGTCTTACGGTGGTGA 107691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 198741419262088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |