Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_011551.1 Length=39867 Score E Sequences producing significant alignments: (Bits) Value seq362 722 0.0 seq367 477 3e-130 seq429 378 2e-100 seq298 136 1e-27 seq1308 102 2e-17 >seq362 Length=5845 Score = 722 bits (800), Expect = 0.0 Identities = 855/1152 (74%), Gaps = 42/1152 (4%) Strand=Plus/Plus Query 30558 GTCAATCCCGACATCTGATTT-TGCAGATGCAAA-TAAACTATAGCGCATGATTT--TCT 30613 ||||| |||| || | | ||| | || ||| | || | ||||||||||| ||| ||| Sbjct 1378 GTCAAACCCGGCACCCGTTTTGTTAAGGTGCTGAGTAGAATATAGCGCATGTTTTGCTCT 1437 Query 30614 TTCGTCAATGGGTATTTAAAATGTCAATGTTTTTATTATGCCGCTGCAATCCCGTTCATC 30673 |||||||||| ||| ||| ||||| |||||||| ||||||||| Sbjct 1438 TTCGTCAATGCGTAC-----------ATGGGTTTAT------GCTGCAATTCCGTTCATC 1480 Query 30674 ATCACACCTAATAACCTAGGAAATTGGCCATCATAGAAATGGGGTTGCGTTTGACGGGGA 30733 || || | ||| | | | ||||| ||| || ||||| || |||||||| || || || Sbjct 1481 ATGACGCTTAAAAGCTTGGGAAAGAGGCTGTCGTAGAAGTGTGGTTGCGTCTGGCGCGGG 1540 Query 30734 TGGTTTGGGTCAGTAAGATTTTTACCAAACTGTAATCCCTTTTCCGTCAGTGACCAGAAT 30793 | || ||| || || || ||||| ||||| || || || ||||| || |||||||| Sbjct 1541 TTATTGTTGTCTGTCAGGTTCTTACCGAACTGCAAACCTTTCTCCGTTAGCGACCAGAAC 1600 Query 30794 AGTTTTTCCTTGTCAGGATGTTTGTTACTTGGACGTGATTTACGCTCAACAATACCTAAT 30853 |||||||| || |||||||| ||| | || || || |||||||| ||| | | || | Sbjct 1601 AGTTTTTCTTTATCAGGATGCTTGCTGCTAGGGCGCGATTTACGTTCAGCGAGTCCGAGC 1660 Query 30854 AATTGCAGACGCTTAAAGCCAGATGGTGGACTGTAAGGTTTGCCATGTAATTGTAGAAGT 30913 | |||||| ||| | | |||||| | || | || ||||| || || | ||| ||| Sbjct 1661 AGTTGCAGCCGCCGATAACCAGATTGGGGCGTATAGGGTTTACCGTGCAGCAGTAAAAGC 1720 Query 30914 TCGGTAAAAGAGTGCGTTACTTCGCTTGAACCTGTTAAACTCCCTTCTGGTGTATCAACA 30973 || || | || || || || || ||||| || |||| ||| ||||||| || | Sbjct 1721 TCAGTGAGCGAATGTGTAACCTCACTTGATCCGGTTACACTTTTCTCTGGTGCGTCTATG 1780 Query 30974 GCGTAATCAGGTAGTATATCCGGTATCCCAAGGGAAGATTGCAGTTTTTTCATAGCCCCC 31033 ||||| | ||||| ||||| || || || ||||| ||||| ||||||||||| || ||| Sbjct 1781 GCGTAGGCTGGTAGAATATCTGGCATGCCGAGGGACGATTGGAGTTTTTTCATTGCGCCC 1840 Query 31034 AACATAGCAGAAGGTGCTATTCGTAGTTCCTGTTTGTAAAAAGCGATCATTGCTAAGCCA 31093 ||||| ||||||||||| || ||||| ||||| ||||||||||||| |||||| || ||| Sbjct 1841 AACATGGCAGAAGGTGCAATACGTAGCTCCTGCTTGTAAAAAGCGAGCATTGCCAATCCA 1900 Query 31094 GCTTGTACTTTTTCGACAAGTACGCCGTTATTGCTTTTTACCGAATCCCTAAACCGCTCG 31153 ||||| || ||||| || ||||| ||||||||||||||||| ||||| ||||||||||| Sbjct 1901 GCTTGAACCTTTTCAACCAGTACACCGTTATTGCTTTTTACTGAATCTCTAAACCGCTCA 1960 Query 31154 TAGACCTGAACTTCAAAATAGGGGTCTATCCATGCTGCATAGCGGATGGCGATAATTTCA 31213 || ||||||||||||||| |||||||||||| || ||||| ||||| || |||| ||| Sbjct 1961 TAAACCTGAACTTCAAAAGCGGGGTCTATCCAAGCAGCATATCGGATAGCAATAAGCTCA 2020 Query 31214 ACTGCCCAGCTGCCAGATTCAAGGCCACCTTTGATGATATTGACCGAAGCACTCTGCGAT 31273 ||||||||||| |||||||||| |||||||||||||||||||||||||| | | || Sbjct 2021 ACTGCCCAGCTACCAGATTCAATACCACCTTTGATGATATTGACCGAAGCTATTTTCGTA 2080 Query 31274 GCTTCGCTTACTTTTTGTACAAAAGCGCTGATACCCTCGCTTCTGAGAAACACAGAAGGC 31333 ||||||||| |||||||||||||| || | || || | | || || || || Sbjct 2081 GCTTCGCTTGCTTTTTGTACAAAATTACTTACTCCTTCTGATTTAAGGAAGTTTGATGGG 2140 Query 31334 CGTTGCGATTCTGTTGCTTTACCCTGAGCAACTGCTGCCCGGTGCAAATCATTCAGACAA 31393 || || ||||| || |||||||| || || ||||| || || || |||||||||| ||| Sbjct 2141 CGCTGAGATTCCGTCGCTTTACCTTGCGCCACTGCCGCACGATGTAAATCATTCAAACAG 2200 Query 31394 TAAAGCCCGAAAGCGTCTTGGCGTACAATGGTATTTTCGATAACGACTAATTTAGACATA 31453 ||| | ||||||||||| || || |||| ||||||||| || || | |||||||| |||| Sbjct 2201 TAACGTCCGAAAGCGTCCTGACGAACAACGGTATTTTCAATTACAATTAATTTAGTCATA 2260 Query 31454 AAAATATTTCTCCGTAATTAAACGAAT-------CAAGGTATTAA--TGTGA-----AAG 31499 | | |||||| | | ||||| |||| || ||| | |||| || Sbjct 2261 ATA--ATTTCTTCATTGTTAAATGAATTTGGTTGAAATACATTGACGGGTGACTTTTAAA 2318 Query 31500 ATTTTGCAGATGGAACCCTAAACCCCGTTATACTTACCTAAACACGGGAGGATTTTTCG- 31558 ||||||| | | ||||| || ||| ||| | ||| || ||||| ||||| Sbjct 2319 ATTTTGCTTGTTG-ACCCTCAAAAGGTTTAAACTAAAGAAAAAACAGGAGG---TTTCGC 2374 Query 31559 TATGGGTCAGGTTGCATTTGATACACAAGAATTTGTTGAAACATTAGAGAATGCAGGCTT 31618 |||||| || |||||||||||||| |||||||| || |||||| |||| || || || || Sbjct 2375 TATGGGCCAAGTTGCATTTGATACTCAAGAATTCGTCGAAACACTAGAAAACGCTGGGTT 2434 Query 31619 GCCAAAAGAGCAGGCAAAAGCAATTTCTATTGCTGTACGTAAGTCACATGAGGTTGCTGA 31678 ||| ||||| ||||||| ||| |||||||| ||||| || |||||||| || || || || Sbjct 2435 GCCGAAAGATCAGGCAAGAGCGATTTCTATCGCTGTTCGCAAGTCACACGAAGTGGCGGA 2494 Query 31679 CGTAGCAACCAA 31690 ||||| || || Sbjct 2495 TGTAGCGACGAA 2506 >seq367 Length=84945 Score = 477 bits (528), Expect = 3e-130 Identities = 603/827 (73%), Gaps = 5/827 (1%) Strand=Plus/Minus Query 30649 TTATGCCGCTGCAATCCCGTTCATCATCACACCTAATAACCTAGGAAATTGGCCATCATA 30708 ||||||||| ||| ||||||||||| || ||| | | | ||||| | | || || Sbjct 4140 TTATGCCGC---AATTCCGTTCATCATGACGTTTAAGAGCTTGGGAAACAGACAGTCGTA 4084 Query 30709 GAAATGGGGTTGCGTTTGACGGGGATGGTTTGGGTCAGTAAGATTTTTACCAAACTGTAA 30768 ||| || || ||||| || || || | || | || || |||||||| |||||||| || Sbjct 4083 GAAGTGTGGCTGCGTCTGGCGCGGGTTATTCGTATCGGTTAGATTTTTGCCAAACTGCAA 4024 Query 30769 TCCCTTTTCCGTCAGTGACCAGAATAGTTTTTCCTTGTCAGGATGTTTGTTACTTGGACG 30828 || || ||||| | |||||||| |||||||| || || ||||| || |||| || || Sbjct 4023 CCCTTTCTCCGTTAACGACCAGAACAGTTTTTCTTTATCGGGATGCTTACTACTGGGGCG 3964 Query 30829 TGATTTACGCTCAACAATACCTAATAATTGCAGACGCTTAAAGCCAGATGGTGGACTGTA 30888 ||||||||| ||| | | || | | ||| | || | |||||||| | || |||| Sbjct 3963 TGATTTACGTTCAGCGAGTCCAAGCAGTTGTAACCGTCGATAGCCAGATTGGGGCGTGTA 3904 Query 30889 AGGTTTGCCATGTAATTGTAGAAGTTCGGTAAAAGAGTGCGTTACTTCGCTTGAACCTGT 30948 ||||||||||| | | ||| || || || || || || ||||| || || || || Sbjct 3903 GGGTTTGCCATGCAGCATCAAAAGCTCTGTGAACGAATGGGTGACTTCACTCGAGCCGGT 3844 Query 30949 TAAACTCCCTTCTGGTGTATCAACAGCGTAATCAGGTAGTATATCCGGTATCCCAAGGGA 31008 || ||| || ||||||| || || ||||| | || || |||||||| || || ||||| Sbjct 3843 TACACTGCCCTCTGGTGCGTCTACGGCGTAGGCGGGCAGAATATCCGGCATGCCGAGGGA 3784 Query 31009 AGATTGCAGTTTTTTCATAGCCCCCAACATAGCAGAAGGTGCTATTCGTAGTTCCTGTTT 31068 ||||||||| |||||||| || |||| ||| || ||||| ||||| || || || || || Sbjct 3783 AGATTGCAGCTTTTTCATTGCTCCCAGCATGGCGGAAGGCGCTATGCGCAGCTCTTGCTT 3724 Query 31069 GTAAAAAGCGATCATTGCTAAGCCAGCTTGTACTTTTTCGACAAGTACGCCGTTATTGCT 31128 ||| ||||||| || || || || |||| |||||||| || |||||||| || ||| Sbjct 3723 GTAGAAAGCGAGCAAGGCCAATCCCGCTTAGACTTTTTCTACCAGTACGCCATTGCTGCC 3664 Query 31129 TTTTACCGAATCCCTAAACCGCTCGTAGACCTGAACTTCAAAATAGGGGTCTATCCATGC 31188 |||||| |||| | ||| |||| || || ||||||||||| || || |||||||| Sbjct 3663 TTTTACTGAATTACGAAATTGCTCATATACTTGAACTTCAAAGGTAGGTTCAATCCATGC 3604 Query 31189 TGCATAGCGGATGGCGATAATTTCAACTGCCCAGCTGCCAGATTCAAGGCCACCTTTGAT 31248 |||||||| || || | || ||| ||||| | | || ||||| ||||||||||| || Sbjct 3603 AGCATAGCGAATAGCAACAAGTTCGTCTGCCTAAGTACCTGATTCTAGGCCACCTTTAAT 3544 Query 31249 GATATTGACCGAAGCACTCTGCGATGCTTCGCTTACTTTTTGTACAAAAGCGCTGATACC 31308 || || |||||||| || | |||||||| | ||||||||| ||| ||||| Sbjct 3543 GACGTTAACCGAAGCCCTTTTTTGGGCTTCGCTCAAAGATTGTACAAATGCGGCAATACC 3484 Query 31309 CTCGCTTCTGAGAAACACAGAAGGCCGTTGCGATTCTGTTGCTTTACCCTGAGCAACTGC 31368 || | | ||| ||||| || || || ||||| |||||| | || || || || Sbjct 3483 ATCAGAACGCATAAATTTTGAAGGACGCTGAGAATCTGTCGCTTTATCTTGCGCCACCGC 3424 Query 31369 TGCCCGGTGCAAATCATTCAGACAATAAAGCCCGAAAGCGTCTTGGCGTACAATGGTATT 31428 || || || |||||||||| ||| ||| | ||||||||||| || || || |||||||| Sbjct 3423 CGCACGATGTAAATCATTCAAACAGTAACGTCCGAAAGCGTCCTGACGGACGATGGTATT 3364 Query 31429 TTCGATAACGACTAATTTAGACATAAAAATATTTCTCCGTAATTAAA 31475 ||| || | |||||||||||||| |||| ||| | |||||||| Sbjct 3363 TTCAATTAGAACTAATTTAGACATGGCAATA--TCTTCATAATTAAA 3319 >seq429 Length=112147 Score = 378 bits (418), Expect = 2e-100 Identities = 741/1076 (69%), Gaps = 52/1076 (5%) Strand=Plus/Minus Query 29570 ATTAGTGACGTTCTAGGAAGTGGGTCAATTCACCTTCGTACCAGTGATCGGTGTGCTCGG 29629 ||||||| ||| |||||||| | | ||| |||||| |||||| || | | || Sbjct 7233 ATTAGTGGCGTGTCAGGAAGTGTTTAACTTCGTCTTCGTGCCAGTGGTCAAGGCGATCTT 7174 Query 29630 TGATTATCCCGATT-TGTTGATGGTGGAAATGATCAAAAAGCTGTTTGATCTCCGCTAAT 29688 | |||| | || || ||||| | | || |||||| | | || || || | Sbjct 7173 CCACGC-CCCGTTGCTGCTGGCGGTGGCAGTTCTCGAAAAGCCGCTGTATATCGGCCAGC 7115 Query 29689 ACGGTATCGATATTCTCACGCTTGCGTAAAATTCGCTTAATCGCCTGCTTTTCTGCGTCA 29748 ||||||| || | ||||||||||| | ||| ||||| | | |||||||| || || Sbjct 7114 ACGGTATGGACGTCTTCACGCTTGCGCAGAATGCGCTTGAGGGTTTGCTTTTCCGCTTCG 7055 Query 29749 TTGATAATCTGGCGCAATGTCTCAGTGATATAGTAAATGCGTCTACACTCATCAGTCATT 29808 | ||| | | |||| | || |||| |||||||| | | ||||| || | || Sbjct 7054 TGGATGGTTTCACGCAGGGGTTCGGTGACGTAGTAAATACAGCGGCACTCTTCGGCCAGC 6995 Query 29809 AACGGTATATGCTCTACCTGAAAACGCTCAGGGGAGGGTGTGCCCGTCACTTCACGTAGC 29868 || || || |||| | | | ||| || || || || ||||| ||||| || || || Sbjct 6994 AAGGGGATGTGCTGTGCTTCAAAGGGCATCGGCGATGGGGTGCCGGTCACATCGCGCAGA 6935 Query 29869 GCCAGCCACACCGCATTACTCCATGAACGCTCAAATCGAAAGCCGTTTGTCATACACCAA 29928 | | || | ||| |||||| | ||||| || ||||||| || || ||||| Sbjct 6934 GAATAGTAAACGGTATTGGTCCATGCCTGTTCAAAACGGAAGCCGTGGGTAATGCACCAT 6875 Query 29929 ACTAAATGTGTTAAATTACGTGTG---TCTGAATGGCTAAAACGCTCTACGGCTTTCGAT 29985 ||||| | | | ||||| ||| || | || |||||||| | |||| | Sbjct 6874 ACTAAGCGAGCAAGGTTACGGGTGGTATCGGTGCGGGTAAAACGCGCAGGTGCTTCAGGC 6815 Query 29986 TGGGGTTGGGGAGTAAAGCTGGAGGTTTGATTAACGGCTTGTTTATCGAGGATATCTAGC 30045 ||| |||| |||| | || ||| ||||||||| || ||| Sbjct 6814 TGG----------TAAACG----GGTTGGC----CGACTTCGCGATCGAGGATGTCCAGC 6773 Query 30046 ACCCATTTTCTGAATTCTTTTGCTATATGTGTACGGGCAAACATAGCGATTAGGTGTGCA 30105 |||||||| | ||| ||||| || || | || ||||||||| || || ||||| || Sbjct 6772 ACCCATTTGCGGAACTCTTTGGCGATCGGCGTGTTGGCAAACATTGCTATCAGGTGCGCG 6713 Query 30106 CCTCTTAGAGAAAAGATGCGAA-CTGGCATTCTAACCGTTCC-----CGTT--TTTCTAA 30157 || | || || || ||||| | || || ||| || |||| ||||| Sbjct 6712 CCGCGCAGGGAGAAAATGCGGATCTTGCTGCGTAAATTGTCGTAAGTCGTTGATTTCTT- 6654 Query 30158 CGACG--CCCAAATTGAC--CGTCGTTGTCATACATTCGGAAAACTCATCTTTATTGCGA 30213 ||| | | ||| | || | ||| ||||| | | ||| ||||| | || ||| Sbjct 6653 CGAGGTACTCAATTCGAGTACTTCG--GTCATCCCGCTAGTAAATTCATCACTGTTCCGA 6596 Query 30214 TTGAAAATTTTTGTTACTGCATCCGTTTCTGTATATTCCAGTGCTCTAGCAAGTTCAGCA 30273 ||| | | |||||| | | || | |||||| |||||| ||||||| |||||| Sbjct 6595 TTGTATAAAACTGTTACACGCTTTGAGTCGGAATATTCGAGTGCTTTAGCAAGCTCAGCA 6536 Query 30274 GAAGTAAACCAAATTTCTCTGTTATGGAAAATAGTTTCAAGAACAGTATTACGGAAAATT 30333 || || ||||| || | | ||| ||| ||| ||||||||||| || |||||||| ||| Sbjct 6535 GAGGTGAACCAGATCTGCCCGTTGTGGGGAATGGTTTCAAGAACGGTGTTACGGAACATT 6476 Query 30334 AAAGTAGTCATAGTAATGATTTCCTTGTTATTTAAGGATAATCACCACCTTTGAGG--TC 30391 || || |||||||||||||||||||| ||| ||||||| ||||||||| | |||| || Sbjct 6475 AAGGTTGTCATAGTAATGATTTCCTTCTTAGTTAAGGAACATCACCACC-TAGAGGTCTC 6417 Query 30392 AATCT----TGGGTGGTGAACTGGACGAGGTTGACCTTACCGGCTAACAAGGATCCCGGC 30447 || || | ||||| || ||| || |||||| |||||||||| ||||| |||||| Sbjct 6416 AAACTCATATTGGTGGCGAGCTGAACAGGGTTGAGACTACCGGCTAAGAAGGA-CCCGGC 6358 Query 30448 GAGCCTTACGGCTCCCCCATCCAGCCCACCATTGATTCTTGATATGGCAGACTGACGCAT 30507 ||||||| ||||||||||||||||||||||||| |||| ||||||||| ||||||||||| Sbjct 6357 GAGCCTTGCGGCTCCCCCATCCAGCCCACCATT-ATTC-TGATATGGCGGACTGACGCAT 6300 Query 30508 -aaaaaaaCACGCTGTCGGCGTGCTGTGCGCCTTGTTAGTTACATCAGGAGGTCAATCCC 30566 ||||||||||||| |||||||| | |||||||| |||| || | | || |||| ||| Sbjct 6299 AAAAAAAACACGCTCTCGGCGTGTTATGCGCCTTCTTAGATA-ACCGGGGTCTCAAACCC 6241 Query 30567 GACATCTGATTTTGCAGATGCAAATAAACTATAGCGCAT--GATTTTCTTTCGTCA 30620 |||| |||| ||||||| ||| || |||||||||||| | | ||||| ||||| Sbjct 6240 GACACCTGAATTTGCAGGTGCGGATTGACTATAGCGCATGGGTTATTCTTCCGTCA 6185 Score = 280 bits (310), Expect = 4e-71 Identities = 587/863 (68%), Gaps = 19/863 (2%) Strand=Plus/Minus Query 33769 CCAGAATGATACGGTTTGTGGATGGGCATTGCGCCACATACGCTTAAGGGAATCGCAGTT 33828 |||||| || | ||| | |||||| || || | ||||| || || | |||| ||| Sbjct 2845 CCAGAACGAGATGGTCTTTGGATGCGCGTTCCACCACAGGCGTTTTATCGAATTACAGGC 2786 Query 33829 AACAAAGATTTTTTCGCTGAGGCCATAAGTTTTAT-CTGTTTCAACGGATTTTTGATACC 33887 |||||| | || | || || || ||||| | | | || | |||| | |||| Sbjct 2785 AACAAACACGCGCTCTGTCAGCCCGTAGGTTTTCTTCCGCTTTA-CGGACTCGGCGTACC 2727 Query 33888 AGCTTGTTGCCTCTCGTTTAACGCCAGGCGGTATATGAGGTAATGCGGCTTCCGCCAGTT 33947 || || ||||| || ||| | |||||| || | || | || ||||| Sbjct 2726 AGTTTCCGGCCTCGCGGATAATTGTCGCCGGTATGGAGGGCAGGGCCACATCGGCCAGCG 2667 Query 33948 CATCTAAATCCAGACCGTAGGCGAGGGCGAATGTCAGAAATGCCGCAACGCCTCCACCAT 34007 |||| | || || ||||||||||||||||| |||| || ||||| ||||| || |||| Sbjct 2666 CATCGAGGTCAAGGCCGTAGGCGAGGGCGAAGGTCAAGAAGGCCGCTACGCCGCCGCCAT 2607 Query 34008 AGCCTAAGCCGAGTTCCATCACCTTACCGATTTGCCGTTGGTCTTTGGTGACGTC-CTCA 34066 ||||||| || || ||||| || || || | ||||| ||| ||||||| | || || Sbjct 2606 AGCCTAATCCAAGCTCCATTACTTTCCCAACTTGCCTTTGCGCTTTGGTCATTTCGCTTG 2547 Query 34067 GGTAAAAGATTAAACGCGCGCGCATAGGCGAGTTTATAGAGGTCATCGCCTTTGCCGTTA 34126 ||| | | | ||||| || ||||| || || || ||||||||||| | ||| Sbjct 2546 GGTCGATG-TGGAACGCCTTGGCGTAGGCCAGCTTGTACAGGTCATCGCCGATACCGGCG 2488 Query 34127 TCAAACTCGCTAAAAGCCTTGACTTTCCAGTTTTCCCCCGCCAGCCATGCCAGCATGCGG 34186 || | |||| || |||| | ||||| | || ||||||||||| ||||||| ||| Sbjct 2487 TCGTAATCGCGGAATGCCTGCAGCTTCCATTCCTCGCCCGCCAGCCACGCCAGCACCCGG 2428 Query 34187 CCTTCGATATTCGACAAATCCGAGATAACCAGCTTTTTACC--CGGTGGTGCAATAATAC 34244 ||||||||||| || || || | || ||||| ||||| ||| |||| || | Sbjct 2427 CCTTCGATATTGCTCAGGTCGGATACTACTAGCTTCTTACCTTCGGGCGTGC--GGATGC 2370 Query 34245 ACCCTCTTAGCGCGGAACTGGTCAGTTGCATAATGTC--ATCACAAATCAGCTCGGCGCA 34302 | | | ||| || |||||||| || |||||| ||| | |||||| || || Sbjct 2369 AGGCGCGTAGTGCAGAACTGGTGAGCGGCATAACGTCGAACGCCAAATCTGC------CA 2316 Query 34303 ACCGGCTTTTAAG-GCTTCAATCCCGTTATCAAT-GGTGTTTGGGTCAAGCGTGGGTCTG 34360 | |||| || || | ||||| ||||| || || | || | | || | Sbjct 2315 CGCCCTTTTTCAGCGCCTTTATCCCCAGGTCAATCTCTGCCTGTGACATG-GATGGCCGA 2257 Query 34361 GGGAGATTATCTGGTTGAAAAACACGCCCCGCCCAGCGTCCGGTGCGTGAGGCGCCACAA 34420 ||||| || || || ||||||| |||||||||||||| ||||| |||||||| |||||| Sbjct 2256 GGGAGGTTGTCGGGCTGAAAAAGCCGCCCCGCCCAGCGCCCGGTACGTGAGGCACCACAA 2197 Query 34421 AATTGCTTAGTTCCTCTAAGTCGTCCATCTGCACTCACCGATTTTAACAGCGCTTTATAT 34480 || ||||| || || | | || ||||| || || |||| | || | || Sbjct 2196 AACTGCTTGGTGCCGCGTAAACGGCCATCGCGGCTGACGGATTCGACCAATTTCTCGTAC 2137 Query 34481 TTACTGGTGCTGGTTGTACAGGATTGCAGACGGACTGACAGCAGTTCGCGTAAATCCGGT 34540 |||||||||||||||||||||||||| |||||||| |||| ||||||| || | Sbjct 2136 TTACTGGTGCTGGTTGTACAGGATTGGAGACGGACGATCAGCCGTTCGCGCAACGCTATC 2077 Query 34541 GGGATATCAGGGTCATTAATGCGGCGCTGTAGCGTACTGGCCTGCATATCTGGTAACGTG 34600 || | ||||||||| || || || |||| || ||||| ||||||||| || | || Sbjct 2076 GGCAGATCAGGGTCGTTGATACGCCGCTTAAGTGTACTTTTCTGCATATCCGGCAGGGTA 2017 Query 34601 ATGCCAAATGCAGAAGCGATATG 34623 ||||| || || | ||||||| Sbjct 2016 ATGCCGAAGGCGTTAACGATATG 1994 Score = 212 bits (234), Expect = 2e-50 Identities = 209/270 (77%), Gaps = 0/270 (0%) Strand=Plus/Minus Query 27360 TTTCCTTTTCATCGCTTCCAGTAATAAATCCTGTATTGCCCGTTTTGAATTGCGTCGTTC 27419 ||||| |||||||| || | ||| | ||||| | || ||||| | |||||| || Sbjct 10719 TTTCCGCTTCATCGCCTCTAATAAAATGTCCTGCACCTGACGCTTTGAGTCGCGTCGCTC 10660 Query 27420 CATGACCACTTCATCGAGGGTATCTTTAGCAACGATATGGTGAATAAAGACAGGGCGGTT 27479 |||||||| |||||||| |||||| | || || || |||||||| || || ||||| Sbjct 10659 CATGACCAGTTCATCGACGGTATCGGTGGCGACAATGTGGTGAATGAATACCGGGCGCGG 10600 Query 27480 ATGTCCGGCTTGTGCCTGACGAGTCGGGCCGATACGTTCGATAATTTGCTGGTACTGCTC 27539 || ||||| || ||||| || ||||||||||| || |||||||| |||||||||||||| Sbjct 10599 GTGCCCGGCCTGAGCCTGTCGGGTCGGGCCGATGCGCTCGATAATCTGCTGGTACTGCTC 10540 Query 27540 TAAGTCCCACCAGTGGGAGAAAAAGACCAGAATATTACCGCCGTCCTGTAAATTTAAGCC 27599 | | ||||||||||||||||||| ||||| | ||||||||||||||| | || | || Sbjct 10539 AAGGCCCCACCAGTGGGAGAAAAACACCAGGACATTACCGCCGTCCTGAAGGTTCAGCCC 10480 Query 27600 GTGTCCACAGCTTGCGGGGTGAGCAAAGAG 27629 ||| || ||| |||||||| || || || Sbjct 10479 GTGCCCGGCGCTGGCGGGGTGGGCGAACAG 10450 Score = 129 bits (142), Expect = 1e-25 Identities = 190/259 (73%), Gaps = 24/259 (9%) Strand=Plus/Minus Query 30374 ATCACCACCTTT-GAGGTCAATCTTG--GGTGGTGAACTGGACGAGGTTGACCTTACCGG 30430 ||||||||| | || | ||||| | ||||| || ||||||| ||| | | ||||| Sbjct 107692 ATCACCACCGTAAGACGCGAATCTAGAGGGTGGCGAGCTGGACGGAGTTCGCGT-ACCGG 107634 Query 30431 C-TAACAAGGATCCCGGCGAGCCTTACGGCTCCCCCATCCAGCCCACCATTGATTCTTGA 30489 |||| | |||| ||||||| ||||||| ||||||||||||||||||| || Sbjct 107633 AGTAACCAA----CCGGTGAGCCTTTCGGCTCCACCATCCAGCCCACCATTGA-----GA 107583 Query 30490 TATGGC-AGACTGACGCATaaaaaaaCACGCTGTCGGCGTG-----CTGTGCGCCTTGTT 30543 | | || ||| || |||||||| ||||||| ||||||| |||| ||| ||| Sbjct 107582 TGTAGCTAGATTGCGACATAAAAAGACACGCTCGCGGCGTGTCATTCTGT-CGCG--GTT 107526 Query 30544 AGTTACATCAGGAGGTCAATCCCGACATCTGATTTTGCAGATGCAAATAAACTATAGCGC 30603 | || | ||||| | ||||||| || |||| |||||||||||||| |||||||||| Sbjct 107525 ACTTCCGGCAGGACGCGAATCCCGGCACCTGAATTTGCAGATGCAAAGCGACTATAGCGC 107466 Query 30604 AT-GATTTTCTTTCGTCAA 30621 || | |||| |||||||| Sbjct 107465 ATGGGATTTCCTTCGTCAA 107447 Score = 116 bits (128), Expect = 9e-22 Identities = 166/232 (72%), Gaps = 20/232 (9%) Strand=Plus/Minus Query 31367 GCTGCCCGGTGCAAATCATTCAGACAATAAAGCCCGAAAGCGTCTTGGCGTACAATGGTA 31426 ||||| ||||| ||||||||| || ||| |||| ||| | |||||||| |||| |||| Sbjct 5359 GCTGCTTTGTGCAGATCATTCAGGCAGTAACGCCCAAAAACATCTTGGCGAACAACGGTA 5300 Query 31427 TTTTCGATAACGACTAATTTAGACATAAAAATATTTCTCCGTAATTAAACGAAT------ 31480 ||||| || || |||||||||||||| || |||||||| |||||||||| || Sbjct 5299 TTTTCAATGACAACTAATTTAGACAT--AACGATTTCTCCATAATTAAACGGATTTGTTT 5242 Query 31481 -CAAGGTAT--------TAATGTGAAAGATTTTGCAGATGGAACCCTAAACCCCGTTATA 31531 ||||||| ||| || || ||||||||||| | | | | | ||| | Sbjct 5241 AAAAGGTATTAGGGGGCTAACTTGCAAAATTTTGCAGATTG-GCGGTCAGATCGCTTACA 5183 Query 31532 CTTACCTAAACACGGGAGGATTTTTCGTATGGGTCAGGTTGCATTTGATACA 31583 ||| || |||| |||||| | | |||||| || || |||||||||||| Sbjct 5182 CTTGGCTTTACACAGGAGGA--TCCCCTATGGGCCAAGTCGCATTTGATACA 5133 Score = 95.1 bits (104), Expect = 3e-15 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 28179 CTCGCCCTGGTCAACAAACCACGCTTGCCCCCATAAGTCCATCAGGCCATTAGGTGAAGG 28238 || |||||||||||| ||||||||||| ||||| | ||| || | ||| ||||| | || Sbjct 9749 CTTGCCCTGGTCAACGAACCACGCTTGTCCCCACAGGTCGATTAAGCCGTTAGGGGCGGG 9690 Query 28239 CGTACCGGTCAGATTTACCCAGCGATGAACAGATTTATGCGC 28280 || || |||||||| |||||||| | ||| |||||||||| Sbjct 9689 GGTGCCTGTCAGATTGACCCAGCGGTCAACGTATTTATGCGC 9648 Score = 82.4 bits (90), Expect = 2e-11 Identities = 123/173 (71%), Gaps = 4/173 (2%) Strand=Plus/Minus Query 28506 ACGCAGGTGGCTCCATTTAAGCGCTTCATCTGGCCAGGTGGATTGCGCTACCCGTAACGG 28565 |||||| || ||||||| ||||||||||| ||||||||||| || || || | || Sbjct 9584 ACGCAGATGCGTCCATTTCAGCGCTTCATCAGGCCAGGTGGACGTGGCGACGCGCAGTGG 9525 Query 28566 GGCTAACACTAATGTCGGTTTGGTTTCACTGCCTGA--TAAATAGAGATTTTCTAATGCC 28623 ||| | || || | || | || || ||||| || | |||| | | || | || Sbjct 9524 GGCCAGTACCAAAGCCGCTCGCGTCTCGCTGCCCGATTTGAATAATG--TGTCCAGCACC 9467 Query 28624 GTCAGGGTTGCTGCTGTTTTGCCCATCCCCATTCCCGCCCAGACATTTGAGCG 28676 || | || || | ||||||||||||||||| |||||||||| ||| |||| Sbjct 9466 GTTAATGTGGCAACGGTTTTGCCCATCCCCATGCCCGCCCAGATATTGCAGCG 9414 >seq298 Length=289783 Score = 136 bits (150), Expect = 1e-27 Identities = 319/474 (67%), Gaps = 8/474 (2%) Strand=Plus/Plus Query 3742 CAATTAG-AGTAAGACTGAGGGTAAAATGCGATGCGCAGAGATATTCAACAAGTGTTAGA 3800 ||||||| | ||| |||||||||| ||||||||||||||||| || ||| ||| Sbjct 265162 CAATTAGGACTAA---TGAGGGTAAAGCAAAATGCGCAGAGATATTCAGCAGGTGCTAGC 265218 Query 3801 GCGATGGGGAACCTGGACCCGTGATAATAATGCCGGGATAGACTGGTCGCCGATAGCGGC 3860 ||||||||| ||| || |||| | || | | | |||||||||||| | || || Sbjct 265219 GCGATGGGGCGTATGGGCCAGTGAAGACAACACTTGCGTTGACTGGTCGCCGGTCGCTGC 265278 Query 3861 AGGTTTTAAGGGATTGCTCCCATTACGACCGT-CTATGCGCCCTTCGTGCTCAGATGAGG 3919 ||||| ||||| |||| ||| || | || | ||| | |||||||| || || | Sbjct 265279 CGGTTTCAAGGGGCTGCTGCCACAGCG-CAGTACGTGGCGGCTGTCGTGCTCCGACGATG 265337 Query 3920 ATGGTCTTATTATCGATAATTGCGTTTCGCAATTGCAAAAAGTACGCCAGCCTGAAGAAC 3979 | ||| | | ||||| | ||||| | ||| |||| ||||| ||||||||||| || | Sbjct 265338 ACGGTTTGCTCATCGACAGCTGCGTGTTGCAGCTGCAGAAAGTCCGCCAGCCTGAGGAGC 265397 Query 3980 TAAGTTTAATTATTGCGTATTACGTCAAGGGCTATTCGAAGCGGGCCATCGCTCGCCGAC 4039 | | | || ||||| |||||||| || | ||| || || || || || || || Sbjct 265398 TTGACCTGCTCATGGCGTACTACGTCAAAGGATTTTCAAAACGAGCGATGGCGCGTAAAC 265457 Query 4040 GTCGA-GTGGATGAGGGGATGATAAGGGCAAAATTACTGATTGCAGAAGGCTTTATTGAC 4098 | | || | ||| || || | || | || || || || ||||| || Sbjct 265458 GCAAATGTTCAGAAGGCTAT-ATCCGTATGCGTTTGCAAATCGCGGAGGGATTTATCGAG 265516 Query 4099 GGTTGTTTATCGCTGCTCGCCGTGCGATTAGACATGGACCCGGAGGTTAAAATTTATTCG 4158 || || | ||| |||| | || | |||||||| || || || ||||| | || Sbjct 265517 GGCTGCCTGTCGATGCTAGATACACGGCTGGACATGGATCCAGAAGTGAAAATCTTCCCG 265576 Query 4159 CCACaaaaaagtaaaaaaaGGATTAGTGCGGTCCGCAAAAAGTTTGGTAATATG 4212 | ||||||||| |||||| | |||| ||| | |||| |||| || |||| || Sbjct 265577 TCGCAAAAAAGTGAAAAAACGCTTAGCGCGCTACGCACAAAGCCTGCTAATGTG 265630 Score = 102 bits (112), Expect = 2e-17 Identities = 218/326 (67%), Gaps = 0/326 (0%) Strand=Plus/Plus Query 2637 TTTACTGAAATTTCCTTTGCTGAAAAAGATGATGATCTGGCACGTAAGATGCGGGGCTGT 2696 ||||| ||||| ||| |||| |||| ||||| || || | || || |||||||| | Sbjct 264288 TTTACCGAAATCTCCCTTGCGGAAAGGGATGAGGACCTTTCGCGAAAAATGCGGGGGCGC 264347 Query 2697 CTGGTGGCAGAAATTAGCGAATTACGCGGACTTAATACCAAAGAACTGGAATCTATCAAA 2756 |||| | ||||| |||| | || || || || |||| || | || || ||||| Sbjct 264348 TTGGTTGGGGAAATCTCCGAACTGCGTGGCCTGAACTCCAAGGAGATTGAGTCCATCAAG 264407 Query 2757 GCCTTTGTCACTCGGACACATGAAAAGTGGATCCCCAAGTTTAAAGAATTCGCCACCCAA 2816 || || | ||||| || |||||| ||| | ||||| | ||||||||||| || Sbjct 264408 GCGTTCATTACTCGTACGCATGAAGTCTGGGTGCCCAAATACCGTGAATTCGCCACACAG 264467 Query 2817 TTTCCCAGACGCTCATTGAGTATTGGTACTACGAATGAAGATGAATTTTTAGGTGATAAA 2876 || | | || ||| | || ||||| ||| | || || ||| | | || || Sbjct 264468 TTCTCGCGCCGTCTGGTGATGTTCGGCACTACCAATCAGGAAGAGTTTCTGGCCGACGAA 264527 Query 2877 ACCGGTAATCGGCGTTGGCTGCCCGTTGAAGTTGGAAAAATGGATGTAGAAGGTATCAAA 2936 ||||| || ||||||||| | || | ||||| || ||| | |||| | |||||| Sbjct 264528 ACCGGCAACCGGCGTTGGTTACCGCTGCGCGTTGGTAAGATGCGTTTAGACGACATCAAA 264587 Query 2937 AAGGATGTCATTCAACTTTGGGCAGA 2962 ||||| || || || ||||| || Sbjct 264588 CGCGATGTGATGCAGCTATGGGCCGA 264613 >seq1308 Length=4734 Score = 102 bits (112), Expect = 2e-17 Identities = 115/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 35778 CCTAAACACGGGAGGATTAATTATGGGTCAGGTTGCATTTGATGCACTACAAGCATCGGA 35837 |||| ||| |||||||| ||||| || |||||||||||| || | || || || || Sbjct 3937 CCTAGACA--GGAGGATTTTCCATGGGCCAAGTTGCATTTGATACATTGCAGGCGTCAGA 3880 Query 35838 AGAACTAGAAAGTGCTGGTATTTCTAGAGAAAAGGCTAGAGCTATCTCACTGGTAGTACG 35897 ||| || |||| ||||| || |||||||| | || || || || || || || ||||| Sbjct 3879 AGAGCTTGAAACCGCTGGCATCTCTAGAGAGCAAGCCAGGGCGATTTCGCTCGTCGTACG 3820 Query 35898 CAAATCGCATGAGGTTGCTGATGTAGCGACAAA 35930 ||| || ||||| || |||||||| || || || Sbjct 3819 CAAGTCTCATGAAGTGGCTGATGTGGCTACTAA 3787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127450187695548