Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_011551.1
Length=39867
Score E
Sequences producing significant alignments: (Bits) Value
seq362 722 0.0
seq367 477 3e-130
seq429 378 2e-100
seq298 136 1e-27
seq1308 102 2e-17
>seq362
Length=5845
Score = 722 bits (800), Expect = 0.0
Identities = 855/1152 (74%), Gaps = 42/1152 (4%)
Strand=Plus/Plus
Query 30558 GTCAATCCCGACATCTGATTT-TGCAGATGCAAA-TAAACTATAGCGCATGATTT--TCT 30613
||||| |||| || | | ||| | || ||| | || | ||||||||||| ||| |||
Sbjct 1378 GTCAAACCCGGCACCCGTTTTGTTAAGGTGCTGAGTAGAATATAGCGCATGTTTTGCTCT 1437
Query 30614 TTCGTCAATGGGTATTTAAAATGTCAATGTTTTTATTATGCCGCTGCAATCCCGTTCATC 30673
|||||||||| ||| ||| ||||| |||||||| |||||||||
Sbjct 1438 TTCGTCAATGCGTAC-----------ATGGGTTTAT------GCTGCAATTCCGTTCATC 1480
Query 30674 ATCACACCTAATAACCTAGGAAATTGGCCATCATAGAAATGGGGTTGCGTTTGACGGGGA 30733
|| || | ||| | | | ||||| ||| || ||||| || |||||||| || || ||
Sbjct 1481 ATGACGCTTAAAAGCTTGGGAAAGAGGCTGTCGTAGAAGTGTGGTTGCGTCTGGCGCGGG 1540
Query 30734 TGGTTTGGGTCAGTAAGATTTTTACCAAACTGTAATCCCTTTTCCGTCAGTGACCAGAAT 30793
| || ||| || || || ||||| ||||| || || || ||||| || ||||||||
Sbjct 1541 TTATTGTTGTCTGTCAGGTTCTTACCGAACTGCAAACCTTTCTCCGTTAGCGACCAGAAC 1600
Query 30794 AGTTTTTCCTTGTCAGGATGTTTGTTACTTGGACGTGATTTACGCTCAACAATACCTAAT 30853
|||||||| || |||||||| ||| | || || || |||||||| ||| | | || |
Sbjct 1601 AGTTTTTCTTTATCAGGATGCTTGCTGCTAGGGCGCGATTTACGTTCAGCGAGTCCGAGC 1660
Query 30854 AATTGCAGACGCTTAAAGCCAGATGGTGGACTGTAAGGTTTGCCATGTAATTGTAGAAGT 30913
| |||||| ||| | | |||||| | || | || ||||| || || | ||| |||
Sbjct 1661 AGTTGCAGCCGCCGATAACCAGATTGGGGCGTATAGGGTTTACCGTGCAGCAGTAAAAGC 1720
Query 30914 TCGGTAAAAGAGTGCGTTACTTCGCTTGAACCTGTTAAACTCCCTTCTGGTGTATCAACA 30973
|| || | || || || || || ||||| || |||| ||| ||||||| || |
Sbjct 1721 TCAGTGAGCGAATGTGTAACCTCACTTGATCCGGTTACACTTTTCTCTGGTGCGTCTATG 1780
Query 30974 GCGTAATCAGGTAGTATATCCGGTATCCCAAGGGAAGATTGCAGTTTTTTCATAGCCCCC 31033
||||| | ||||| ||||| || || || ||||| ||||| ||||||||||| || |||
Sbjct 1781 GCGTAGGCTGGTAGAATATCTGGCATGCCGAGGGACGATTGGAGTTTTTTCATTGCGCCC 1840
Query 31034 AACATAGCAGAAGGTGCTATTCGTAGTTCCTGTTTGTAAAAAGCGATCATTGCTAAGCCA 31093
||||| ||||||||||| || ||||| ||||| ||||||||||||| |||||| || |||
Sbjct 1841 AACATGGCAGAAGGTGCAATACGTAGCTCCTGCTTGTAAAAAGCGAGCATTGCCAATCCA 1900
Query 31094 GCTTGTACTTTTTCGACAAGTACGCCGTTATTGCTTTTTACCGAATCCCTAAACCGCTCG 31153
||||| || ||||| || ||||| ||||||||||||||||| ||||| |||||||||||
Sbjct 1901 GCTTGAACCTTTTCAACCAGTACACCGTTATTGCTTTTTACTGAATCTCTAAACCGCTCA 1960
Query 31154 TAGACCTGAACTTCAAAATAGGGGTCTATCCATGCTGCATAGCGGATGGCGATAATTTCA 31213
|| ||||||||||||||| |||||||||||| || ||||| ||||| || |||| |||
Sbjct 1961 TAAACCTGAACTTCAAAAGCGGGGTCTATCCAAGCAGCATATCGGATAGCAATAAGCTCA 2020
Query 31214 ACTGCCCAGCTGCCAGATTCAAGGCCACCTTTGATGATATTGACCGAAGCACTCTGCGAT 31273
||||||||||| |||||||||| |||||||||||||||||||||||||| | | ||
Sbjct 2021 ACTGCCCAGCTACCAGATTCAATACCACCTTTGATGATATTGACCGAAGCTATTTTCGTA 2080
Query 31274 GCTTCGCTTACTTTTTGTACAAAAGCGCTGATACCCTCGCTTCTGAGAAACACAGAAGGC 31333
||||||||| |||||||||||||| || | || || | | || || || ||
Sbjct 2081 GCTTCGCTTGCTTTTTGTACAAAATTACTTACTCCTTCTGATTTAAGGAAGTTTGATGGG 2140
Query 31334 CGTTGCGATTCTGTTGCTTTACCCTGAGCAACTGCTGCCCGGTGCAAATCATTCAGACAA 31393
|| || ||||| || |||||||| || || ||||| || || || |||||||||| |||
Sbjct 2141 CGCTGAGATTCCGTCGCTTTACCTTGCGCCACTGCCGCACGATGTAAATCATTCAAACAG 2200
Query 31394 TAAAGCCCGAAAGCGTCTTGGCGTACAATGGTATTTTCGATAACGACTAATTTAGACATA 31453
||| | ||||||||||| || || |||| ||||||||| || || | |||||||| ||||
Sbjct 2201 TAACGTCCGAAAGCGTCCTGACGAACAACGGTATTTTCAATTACAATTAATTTAGTCATA 2260
Query 31454 AAAATATTTCTCCGTAATTAAACGAAT-------CAAGGTATTAA--TGTGA-----AAG 31499
| | |||||| | | ||||| |||| || ||| | |||| ||
Sbjct 2261 ATA--ATTTCTTCATTGTTAAATGAATTTGGTTGAAATACATTGACGGGTGACTTTTAAA 2318
Query 31500 ATTTTGCAGATGGAACCCTAAACCCCGTTATACTTACCTAAACACGGGAGGATTTTTCG- 31558
||||||| | | ||||| || ||| ||| | ||| || ||||| |||||
Sbjct 2319 ATTTTGCTTGTTG-ACCCTCAAAAGGTTTAAACTAAAGAAAAAACAGGAGG---TTTCGC 2374
Query 31559 TATGGGTCAGGTTGCATTTGATACACAAGAATTTGTTGAAACATTAGAGAATGCAGGCTT 31618
|||||| || |||||||||||||| |||||||| || |||||| |||| || || || ||
Sbjct 2375 TATGGGCCAAGTTGCATTTGATACTCAAGAATTCGTCGAAACACTAGAAAACGCTGGGTT 2434
Query 31619 GCCAAAAGAGCAGGCAAAAGCAATTTCTATTGCTGTACGTAAGTCACATGAGGTTGCTGA 31678
||| ||||| ||||||| ||| |||||||| ||||| || |||||||| || || || ||
Sbjct 2435 GCCGAAAGATCAGGCAAGAGCGATTTCTATCGCTGTTCGCAAGTCACACGAAGTGGCGGA 2494
Query 31679 CGTAGCAACCAA 31690
||||| || ||
Sbjct 2495 TGTAGCGACGAA 2506
>seq367
Length=84945
Score = 477 bits (528), Expect = 3e-130
Identities = 603/827 (73%), Gaps = 5/827 (1%)
Strand=Plus/Minus
Query 30649 TTATGCCGCTGCAATCCCGTTCATCATCACACCTAATAACCTAGGAAATTGGCCATCATA 30708
||||||||| ||| ||||||||||| || ||| | | | ||||| | | || ||
Sbjct 4140 TTATGCCGC---AATTCCGTTCATCATGACGTTTAAGAGCTTGGGAAACAGACAGTCGTA 4084
Query 30709 GAAATGGGGTTGCGTTTGACGGGGATGGTTTGGGTCAGTAAGATTTTTACCAAACTGTAA 30768
||| || || ||||| || || || | || | || || |||||||| |||||||| ||
Sbjct 4083 GAAGTGTGGCTGCGTCTGGCGCGGGTTATTCGTATCGGTTAGATTTTTGCCAAACTGCAA 4024
Query 30769 TCCCTTTTCCGTCAGTGACCAGAATAGTTTTTCCTTGTCAGGATGTTTGTTACTTGGACG 30828
|| || ||||| | |||||||| |||||||| || || ||||| || |||| || ||
Sbjct 4023 CCCTTTCTCCGTTAACGACCAGAACAGTTTTTCTTTATCGGGATGCTTACTACTGGGGCG 3964
Query 30829 TGATTTACGCTCAACAATACCTAATAATTGCAGACGCTTAAAGCCAGATGGTGGACTGTA 30888
||||||||| ||| | | || | | ||| | || | |||||||| | || ||||
Sbjct 3963 TGATTTACGTTCAGCGAGTCCAAGCAGTTGTAACCGTCGATAGCCAGATTGGGGCGTGTA 3904
Query 30889 AGGTTTGCCATGTAATTGTAGAAGTTCGGTAAAAGAGTGCGTTACTTCGCTTGAACCTGT 30948
||||||||||| | | ||| || || || || || || ||||| || || || ||
Sbjct 3903 GGGTTTGCCATGCAGCATCAAAAGCTCTGTGAACGAATGGGTGACTTCACTCGAGCCGGT 3844
Query 30949 TAAACTCCCTTCTGGTGTATCAACAGCGTAATCAGGTAGTATATCCGGTATCCCAAGGGA 31008
|| ||| || ||||||| || || ||||| | || || |||||||| || || |||||
Sbjct 3843 TACACTGCCCTCTGGTGCGTCTACGGCGTAGGCGGGCAGAATATCCGGCATGCCGAGGGA 3784
Query 31009 AGATTGCAGTTTTTTCATAGCCCCCAACATAGCAGAAGGTGCTATTCGTAGTTCCTGTTT 31068
||||||||| |||||||| || |||| ||| || ||||| ||||| || || || || ||
Sbjct 3783 AGATTGCAGCTTTTTCATTGCTCCCAGCATGGCGGAAGGCGCTATGCGCAGCTCTTGCTT 3724
Query 31069 GTAAAAAGCGATCATTGCTAAGCCAGCTTGTACTTTTTCGACAAGTACGCCGTTATTGCT 31128
||| ||||||| || || || || |||| |||||||| || |||||||| || |||
Sbjct 3723 GTAGAAAGCGAGCAAGGCCAATCCCGCTTAGACTTTTTCTACCAGTACGCCATTGCTGCC 3664
Query 31129 TTTTACCGAATCCCTAAACCGCTCGTAGACCTGAACTTCAAAATAGGGGTCTATCCATGC 31188
|||||| |||| | ||| |||| || || ||||||||||| || || ||||||||
Sbjct 3663 TTTTACTGAATTACGAAATTGCTCATATACTTGAACTTCAAAGGTAGGTTCAATCCATGC 3604
Query 31189 TGCATAGCGGATGGCGATAATTTCAACTGCCCAGCTGCCAGATTCAAGGCCACCTTTGAT 31248
|||||||| || || | || ||| ||||| | | || ||||| ||||||||||| ||
Sbjct 3603 AGCATAGCGAATAGCAACAAGTTCGTCTGCCTAAGTACCTGATTCTAGGCCACCTTTAAT 3544
Query 31249 GATATTGACCGAAGCACTCTGCGATGCTTCGCTTACTTTTTGTACAAAAGCGCTGATACC 31308
|| || |||||||| || | |||||||| | ||||||||| ||| |||||
Sbjct 3543 GACGTTAACCGAAGCCCTTTTTTGGGCTTCGCTCAAAGATTGTACAAATGCGGCAATACC 3484
Query 31309 CTCGCTTCTGAGAAACACAGAAGGCCGTTGCGATTCTGTTGCTTTACCCTGAGCAACTGC 31368
|| | | ||| ||||| || || || ||||| |||||| | || || || ||
Sbjct 3483 ATCAGAACGCATAAATTTTGAAGGACGCTGAGAATCTGTCGCTTTATCTTGCGCCACCGC 3424
Query 31369 TGCCCGGTGCAAATCATTCAGACAATAAAGCCCGAAAGCGTCTTGGCGTACAATGGTATT 31428
|| || || |||||||||| ||| ||| | ||||||||||| || || || ||||||||
Sbjct 3423 CGCACGATGTAAATCATTCAAACAGTAACGTCCGAAAGCGTCCTGACGGACGATGGTATT 3364
Query 31429 TTCGATAACGACTAATTTAGACATAAAAATATTTCTCCGTAATTAAA 31475
||| || | |||||||||||||| |||| ||| | ||||||||
Sbjct 3363 TTCAATTAGAACTAATTTAGACATGGCAATA--TCTTCATAATTAAA 3319
>seq429
Length=112147
Score = 378 bits (418), Expect = 2e-100
Identities = 741/1076 (69%), Gaps = 52/1076 (5%)
Strand=Plus/Minus
Query 29570 ATTAGTGACGTTCTAGGAAGTGGGTCAATTCACCTTCGTACCAGTGATCGGTGTGCTCGG 29629
||||||| ||| |||||||| | | ||| |||||| |||||| || | | ||
Sbjct 7233 ATTAGTGGCGTGTCAGGAAGTGTTTAACTTCGTCTTCGTGCCAGTGGTCAAGGCGATCTT 7174
Query 29630 TGATTATCCCGATT-TGTTGATGGTGGAAATGATCAAAAAGCTGTTTGATCTCCGCTAAT 29688
| |||| | || || ||||| | | || |||||| | | || || || |
Sbjct 7173 CCACGC-CCCGTTGCTGCTGGCGGTGGCAGTTCTCGAAAAGCCGCTGTATATCGGCCAGC 7115
Query 29689 ACGGTATCGATATTCTCACGCTTGCGTAAAATTCGCTTAATCGCCTGCTTTTCTGCGTCA 29748
||||||| || | ||||||||||| | ||| ||||| | | |||||||| || ||
Sbjct 7114 ACGGTATGGACGTCTTCACGCTTGCGCAGAATGCGCTTGAGGGTTTGCTTTTCCGCTTCG 7055
Query 29749 TTGATAATCTGGCGCAATGTCTCAGTGATATAGTAAATGCGTCTACACTCATCAGTCATT 29808
| ||| | | |||| | || |||| |||||||| | | ||||| || | ||
Sbjct 7054 TGGATGGTTTCACGCAGGGGTTCGGTGACGTAGTAAATACAGCGGCACTCTTCGGCCAGC 6995
Query 29809 AACGGTATATGCTCTACCTGAAAACGCTCAGGGGAGGGTGTGCCCGTCACTTCACGTAGC 29868
|| || || |||| | | | ||| || || || || ||||| ||||| || || ||
Sbjct 6994 AAGGGGATGTGCTGTGCTTCAAAGGGCATCGGCGATGGGGTGCCGGTCACATCGCGCAGA 6935
Query 29869 GCCAGCCACACCGCATTACTCCATGAACGCTCAAATCGAAAGCCGTTTGTCATACACCAA 29928
| | || | ||| |||||| | ||||| || ||||||| || || |||||
Sbjct 6934 GAATAGTAAACGGTATTGGTCCATGCCTGTTCAAAACGGAAGCCGTGGGTAATGCACCAT 6875
Query 29929 ACTAAATGTGTTAAATTACGTGTG---TCTGAATGGCTAAAACGCTCTACGGCTTTCGAT 29985
||||| | | | ||||| ||| || | || |||||||| | |||| |
Sbjct 6874 ACTAAGCGAGCAAGGTTACGGGTGGTATCGGTGCGGGTAAAACGCGCAGGTGCTTCAGGC 6815
Query 29986 TGGGGTTGGGGAGTAAAGCTGGAGGTTTGATTAACGGCTTGTTTATCGAGGATATCTAGC 30045
||| |||| |||| | || ||| ||||||||| || |||
Sbjct 6814 TGG----------TAAACG----GGTTGGC----CGACTTCGCGATCGAGGATGTCCAGC 6773
Query 30046 ACCCATTTTCTGAATTCTTTTGCTATATGTGTACGGGCAAACATAGCGATTAGGTGTGCA 30105
|||||||| | ||| ||||| || || | || ||||||||| || || ||||| ||
Sbjct 6772 ACCCATTTGCGGAACTCTTTGGCGATCGGCGTGTTGGCAAACATTGCTATCAGGTGCGCG 6713
Query 30106 CCTCTTAGAGAAAAGATGCGAA-CTGGCATTCTAACCGTTCC-----CGTT--TTTCTAA 30157
|| | || || || ||||| | || || ||| || |||| |||||
Sbjct 6712 CCGCGCAGGGAGAAAATGCGGATCTTGCTGCGTAAATTGTCGTAAGTCGTTGATTTCTT- 6654
Query 30158 CGACG--CCCAAATTGAC--CGTCGTTGTCATACATTCGGAAAACTCATCTTTATTGCGA 30213
||| | | ||| | || | ||| ||||| | | ||| ||||| | || |||
Sbjct 6653 CGAGGTACTCAATTCGAGTACTTCG--GTCATCCCGCTAGTAAATTCATCACTGTTCCGA 6596
Query 30214 TTGAAAATTTTTGTTACTGCATCCGTTTCTGTATATTCCAGTGCTCTAGCAAGTTCAGCA 30273
||| | | |||||| | | || | |||||| |||||| ||||||| ||||||
Sbjct 6595 TTGTATAAAACTGTTACACGCTTTGAGTCGGAATATTCGAGTGCTTTAGCAAGCTCAGCA 6536
Query 30274 GAAGTAAACCAAATTTCTCTGTTATGGAAAATAGTTTCAAGAACAGTATTACGGAAAATT 30333
|| || ||||| || | | ||| ||| ||| ||||||||||| || |||||||| |||
Sbjct 6535 GAGGTGAACCAGATCTGCCCGTTGTGGGGAATGGTTTCAAGAACGGTGTTACGGAACATT 6476
Query 30334 AAAGTAGTCATAGTAATGATTTCCTTGTTATTTAAGGATAATCACCACCTTTGAGG--TC 30391
|| || |||||||||||||||||||| ||| ||||||| ||||||||| | |||| ||
Sbjct 6475 AAGGTTGTCATAGTAATGATTTCCTTCTTAGTTAAGGAACATCACCACC-TAGAGGTCTC 6417
Query 30392 AATCT----TGGGTGGTGAACTGGACGAGGTTGACCTTACCGGCTAACAAGGATCCCGGC 30447
|| || | ||||| || ||| || |||||| |||||||||| ||||| ||||||
Sbjct 6416 AAACTCATATTGGTGGCGAGCTGAACAGGGTTGAGACTACCGGCTAAGAAGGA-CCCGGC 6358
Query 30448 GAGCCTTACGGCTCCCCCATCCAGCCCACCATTGATTCTTGATATGGCAGACTGACGCAT 30507
||||||| ||||||||||||||||||||||||| |||| ||||||||| |||||||||||
Sbjct 6357 GAGCCTTGCGGCTCCCCCATCCAGCCCACCATT-ATTC-TGATATGGCGGACTGACGCAT 6300
Query 30508 -aaaaaaaCACGCTGTCGGCGTGCTGTGCGCCTTGTTAGTTACATCAGGAGGTCAATCCC 30566
||||||||||||| |||||||| | |||||||| |||| || | | || |||| |||
Sbjct 6299 AAAAAAAACACGCTCTCGGCGTGTTATGCGCCTTCTTAGATA-ACCGGGGTCTCAAACCC 6241
Query 30567 GACATCTGATTTTGCAGATGCAAATAAACTATAGCGCAT--GATTTTCTTTCGTCA 30620
|||| |||| ||||||| ||| || |||||||||||| | | ||||| |||||
Sbjct 6240 GACACCTGAATTTGCAGGTGCGGATTGACTATAGCGCATGGGTTATTCTTCCGTCA 6185
Score = 280 bits (310), Expect = 4e-71
Identities = 587/863 (68%), Gaps = 19/863 (2%)
Strand=Plus/Minus
Query 33769 CCAGAATGATACGGTTTGTGGATGGGCATTGCGCCACATACGCTTAAGGGAATCGCAGTT 33828
|||||| || | ||| | |||||| || || | ||||| || || | |||| |||
Sbjct 2845 CCAGAACGAGATGGTCTTTGGATGCGCGTTCCACCACAGGCGTTTTATCGAATTACAGGC 2786
Query 33829 AACAAAGATTTTTTCGCTGAGGCCATAAGTTTTAT-CTGTTTCAACGGATTTTTGATACC 33887
|||||| | || | || || || ||||| | | | || | |||| | ||||
Sbjct 2785 AACAAACACGCGCTCTGTCAGCCCGTAGGTTTTCTTCCGCTTTA-CGGACTCGGCGTACC 2727
Query 33888 AGCTTGTTGCCTCTCGTTTAACGCCAGGCGGTATATGAGGTAATGCGGCTTCCGCCAGTT 33947
|| || ||||| || ||| | |||||| || | || | || |||||
Sbjct 2726 AGTTTCCGGCCTCGCGGATAATTGTCGCCGGTATGGAGGGCAGGGCCACATCGGCCAGCG 2667
Query 33948 CATCTAAATCCAGACCGTAGGCGAGGGCGAATGTCAGAAATGCCGCAACGCCTCCACCAT 34007
|||| | || || ||||||||||||||||| |||| || ||||| ||||| || ||||
Sbjct 2666 CATCGAGGTCAAGGCCGTAGGCGAGGGCGAAGGTCAAGAAGGCCGCTACGCCGCCGCCAT 2607
Query 34008 AGCCTAAGCCGAGTTCCATCACCTTACCGATTTGCCGTTGGTCTTTGGTGACGTC-CTCA 34066
||||||| || || ||||| || || || | ||||| ||| ||||||| | || ||
Sbjct 2606 AGCCTAATCCAAGCTCCATTACTTTCCCAACTTGCCTTTGCGCTTTGGTCATTTCGCTTG 2547
Query 34067 GGTAAAAGATTAAACGCGCGCGCATAGGCGAGTTTATAGAGGTCATCGCCTTTGCCGTTA 34126
||| | | | ||||| || ||||| || || || ||||||||||| | |||
Sbjct 2546 GGTCGATG-TGGAACGCCTTGGCGTAGGCCAGCTTGTACAGGTCATCGCCGATACCGGCG 2488
Query 34127 TCAAACTCGCTAAAAGCCTTGACTTTCCAGTTTTCCCCCGCCAGCCATGCCAGCATGCGG 34186
|| | |||| || |||| | ||||| | || ||||||||||| ||||||| |||
Sbjct 2487 TCGTAATCGCGGAATGCCTGCAGCTTCCATTCCTCGCCCGCCAGCCACGCCAGCACCCGG 2428
Query 34187 CCTTCGATATTCGACAAATCCGAGATAACCAGCTTTTTACC--CGGTGGTGCAATAATAC 34244
||||||||||| || || || | || ||||| ||||| ||| |||| || |
Sbjct 2427 CCTTCGATATTGCTCAGGTCGGATACTACTAGCTTCTTACCTTCGGGCGTGC--GGATGC 2370
Query 34245 ACCCTCTTAGCGCGGAACTGGTCAGTTGCATAATGTC--ATCACAAATCAGCTCGGCGCA 34302
| | | ||| || |||||||| || |||||| ||| | |||||| || ||
Sbjct 2369 AGGCGCGTAGTGCAGAACTGGTGAGCGGCATAACGTCGAACGCCAAATCTGC------CA 2316
Query 34303 ACCGGCTTTTAAG-GCTTCAATCCCGTTATCAAT-GGTGTTTGGGTCAAGCGTGGGTCTG 34360
| |||| || || | ||||| ||||| || || | || | | || |
Sbjct 2315 CGCCCTTTTTCAGCGCCTTTATCCCCAGGTCAATCTCTGCCTGTGACATG-GATGGCCGA 2257
Query 34361 GGGAGATTATCTGGTTGAAAAACACGCCCCGCCCAGCGTCCGGTGCGTGAGGCGCCACAA 34420
||||| || || || ||||||| |||||||||||||| ||||| |||||||| ||||||
Sbjct 2256 GGGAGGTTGTCGGGCTGAAAAAGCCGCCCCGCCCAGCGCCCGGTACGTGAGGCACCACAA 2197
Query 34421 AATTGCTTAGTTCCTCTAAGTCGTCCATCTGCACTCACCGATTTTAACAGCGCTTTATAT 34480
|| ||||| || || | | || ||||| || || |||| | || | ||
Sbjct 2196 AACTGCTTGGTGCCGCGTAAACGGCCATCGCGGCTGACGGATTCGACCAATTTCTCGTAC 2137
Query 34481 TTACTGGTGCTGGTTGTACAGGATTGCAGACGGACTGACAGCAGTTCGCGTAAATCCGGT 34540
|||||||||||||||||||||||||| |||||||| |||| ||||||| || |
Sbjct 2136 TTACTGGTGCTGGTTGTACAGGATTGGAGACGGACGATCAGCCGTTCGCGCAACGCTATC 2077
Query 34541 GGGATATCAGGGTCATTAATGCGGCGCTGTAGCGTACTGGCCTGCATATCTGGTAACGTG 34600
|| | ||||||||| || || || |||| || ||||| ||||||||| || | ||
Sbjct 2076 GGCAGATCAGGGTCGTTGATACGCCGCTTAAGTGTACTTTTCTGCATATCCGGCAGGGTA 2017
Query 34601 ATGCCAAATGCAGAAGCGATATG 34623
||||| || || | |||||||
Sbjct 2016 ATGCCGAAGGCGTTAACGATATG 1994
Score = 212 bits (234), Expect = 2e-50
Identities = 209/270 (77%), Gaps = 0/270 (0%)
Strand=Plus/Minus
Query 27360 TTTCCTTTTCATCGCTTCCAGTAATAAATCCTGTATTGCCCGTTTTGAATTGCGTCGTTC 27419
||||| |||||||| || | ||| | ||||| | || ||||| | |||||| ||
Sbjct 10719 TTTCCGCTTCATCGCCTCTAATAAAATGTCCTGCACCTGACGCTTTGAGTCGCGTCGCTC 10660
Query 27420 CATGACCACTTCATCGAGGGTATCTTTAGCAACGATATGGTGAATAAAGACAGGGCGGTT 27479
|||||||| |||||||| |||||| | || || || |||||||| || || |||||
Sbjct 10659 CATGACCAGTTCATCGACGGTATCGGTGGCGACAATGTGGTGAATGAATACCGGGCGCGG 10600
Query 27480 ATGTCCGGCTTGTGCCTGACGAGTCGGGCCGATACGTTCGATAATTTGCTGGTACTGCTC 27539
|| ||||| || ||||| || ||||||||||| || |||||||| ||||||||||||||
Sbjct 10599 GTGCCCGGCCTGAGCCTGTCGGGTCGGGCCGATGCGCTCGATAATCTGCTGGTACTGCTC 10540
Query 27540 TAAGTCCCACCAGTGGGAGAAAAAGACCAGAATATTACCGCCGTCCTGTAAATTTAAGCC 27599
| | ||||||||||||||||||| ||||| | ||||||||||||||| | || | ||
Sbjct 10539 AAGGCCCCACCAGTGGGAGAAAAACACCAGGACATTACCGCCGTCCTGAAGGTTCAGCCC 10480
Query 27600 GTGTCCACAGCTTGCGGGGTGAGCAAAGAG 27629
||| || ||| |||||||| || || ||
Sbjct 10479 GTGCCCGGCGCTGGCGGGGTGGGCGAACAG 10450
Score = 129 bits (142), Expect = 1e-25
Identities = 190/259 (73%), Gaps = 24/259 (9%)
Strand=Plus/Minus
Query 30374 ATCACCACCTTT-GAGGTCAATCTTG--GGTGGTGAACTGGACGAGGTTGACCTTACCGG 30430
||||||||| | || | ||||| | ||||| || ||||||| ||| | | |||||
Sbjct 107692 ATCACCACCGTAAGACGCGAATCTAGAGGGTGGCGAGCTGGACGGAGTTCGCGT-ACCGG 107634
Query 30431 C-TAACAAGGATCCCGGCGAGCCTTACGGCTCCCCCATCCAGCCCACCATTGATTCTTGA 30489
|||| | |||| ||||||| ||||||| ||||||||||||||||||| ||
Sbjct 107633 AGTAACCAA----CCGGTGAGCCTTTCGGCTCCACCATCCAGCCCACCATTGA-----GA 107583
Query 30490 TATGGC-AGACTGACGCATaaaaaaaCACGCTGTCGGCGTG-----CTGTGCGCCTTGTT 30543
| | || ||| || |||||||| ||||||| ||||||| |||| ||| |||
Sbjct 107582 TGTAGCTAGATTGCGACATAAAAAGACACGCTCGCGGCGTGTCATTCTGT-CGCG--GTT 107526
Query 30544 AGTTACATCAGGAGGTCAATCCCGACATCTGATTTTGCAGATGCAAATAAACTATAGCGC 30603
| || | ||||| | ||||||| || |||| |||||||||||||| ||||||||||
Sbjct 107525 ACTTCCGGCAGGACGCGAATCCCGGCACCTGAATTTGCAGATGCAAAGCGACTATAGCGC 107466
Query 30604 AT-GATTTTCTTTCGTCAA 30621
|| | |||| ||||||||
Sbjct 107465 ATGGGATTTCCTTCGTCAA 107447
Score = 116 bits (128), Expect = 9e-22
Identities = 166/232 (72%), Gaps = 20/232 (9%)
Strand=Plus/Minus
Query 31367 GCTGCCCGGTGCAAATCATTCAGACAATAAAGCCCGAAAGCGTCTTGGCGTACAATGGTA 31426
||||| ||||| ||||||||| || ||| |||| ||| | |||||||| |||| ||||
Sbjct 5359 GCTGCTTTGTGCAGATCATTCAGGCAGTAACGCCCAAAAACATCTTGGCGAACAACGGTA 5300
Query 31427 TTTTCGATAACGACTAATTTAGACATAAAAATATTTCTCCGTAATTAAACGAAT------ 31480
||||| || || |||||||||||||| || |||||||| |||||||||| ||
Sbjct 5299 TTTTCAATGACAACTAATTTAGACAT--AACGATTTCTCCATAATTAAACGGATTTGTTT 5242
Query 31481 -CAAGGTAT--------TAATGTGAAAGATTTTGCAGATGGAACCCTAAACCCCGTTATA 31531
||||||| ||| || || ||||||||||| | | | | | ||| |
Sbjct 5241 AAAAGGTATTAGGGGGCTAACTTGCAAAATTTTGCAGATTG-GCGGTCAGATCGCTTACA 5183
Query 31532 CTTACCTAAACACGGGAGGATTTTTCGTATGGGTCAGGTTGCATTTGATACA 31583
||| || |||| |||||| | | |||||| || || ||||||||||||
Sbjct 5182 CTTGGCTTTACACAGGAGGA--TCCCCTATGGGCCAAGTCGCATTTGATACA 5133
Score = 95.1 bits (104), Expect = 3e-15
Identities = 82/102 (80%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 28179 CTCGCCCTGGTCAACAAACCACGCTTGCCCCCATAAGTCCATCAGGCCATTAGGTGAAGG 28238
|| |||||||||||| ||||||||||| ||||| | ||| || | ||| ||||| | ||
Sbjct 9749 CTTGCCCTGGTCAACGAACCACGCTTGTCCCCACAGGTCGATTAAGCCGTTAGGGGCGGG 9690
Query 28239 CGTACCGGTCAGATTTACCCAGCGATGAACAGATTTATGCGC 28280
|| || |||||||| |||||||| | ||| ||||||||||
Sbjct 9689 GGTGCCTGTCAGATTGACCCAGCGGTCAACGTATTTATGCGC 9648
Score = 82.4 bits (90), Expect = 2e-11
Identities = 123/173 (71%), Gaps = 4/173 (2%)
Strand=Plus/Minus
Query 28506 ACGCAGGTGGCTCCATTTAAGCGCTTCATCTGGCCAGGTGGATTGCGCTACCCGTAACGG 28565
|||||| || ||||||| ||||||||||| ||||||||||| || || || | ||
Sbjct 9584 ACGCAGATGCGTCCATTTCAGCGCTTCATCAGGCCAGGTGGACGTGGCGACGCGCAGTGG 9525
Query 28566 GGCTAACACTAATGTCGGTTTGGTTTCACTGCCTGA--TAAATAGAGATTTTCTAATGCC 28623
||| | || || | || | || || ||||| || | |||| | | || | ||
Sbjct 9524 GGCCAGTACCAAAGCCGCTCGCGTCTCGCTGCCCGATTTGAATAATG--TGTCCAGCACC 9467
Query 28624 GTCAGGGTTGCTGCTGTTTTGCCCATCCCCATTCCCGCCCAGACATTTGAGCG 28676
|| | || || | ||||||||||||||||| |||||||||| ||| ||||
Sbjct 9466 GTTAATGTGGCAACGGTTTTGCCCATCCCCATGCCCGCCCAGATATTGCAGCG 9414
>seq298
Length=289783
Score = 136 bits (150), Expect = 1e-27
Identities = 319/474 (67%), Gaps = 8/474 (2%)
Strand=Plus/Plus
Query 3742 CAATTAG-AGTAAGACTGAGGGTAAAATGCGATGCGCAGAGATATTCAACAAGTGTTAGA 3800
||||||| | ||| |||||||||| ||||||||||||||||| || ||| |||
Sbjct 265162 CAATTAGGACTAA---TGAGGGTAAAGCAAAATGCGCAGAGATATTCAGCAGGTGCTAGC 265218
Query 3801 GCGATGGGGAACCTGGACCCGTGATAATAATGCCGGGATAGACTGGTCGCCGATAGCGGC 3860
||||||||| ||| || |||| | || | | | |||||||||||| | || ||
Sbjct 265219 GCGATGGGGCGTATGGGCCAGTGAAGACAACACTTGCGTTGACTGGTCGCCGGTCGCTGC 265278
Query 3861 AGGTTTTAAGGGATTGCTCCCATTACGACCGT-CTATGCGCCCTTCGTGCTCAGATGAGG 3919
||||| ||||| |||| ||| || | || | ||| | |||||||| || || |
Sbjct 265279 CGGTTTCAAGGGGCTGCTGCCACAGCG-CAGTACGTGGCGGCTGTCGTGCTCCGACGATG 265337
Query 3920 ATGGTCTTATTATCGATAATTGCGTTTCGCAATTGCAAAAAGTACGCCAGCCTGAAGAAC 3979
| ||| | | ||||| | ||||| | ||| |||| ||||| ||||||||||| || |
Sbjct 265338 ACGGTTTGCTCATCGACAGCTGCGTGTTGCAGCTGCAGAAAGTCCGCCAGCCTGAGGAGC 265397
Query 3980 TAAGTTTAATTATTGCGTATTACGTCAAGGGCTATTCGAAGCGGGCCATCGCTCGCCGAC 4039
| | | || ||||| |||||||| || | ||| || || || || || || ||
Sbjct 265398 TTGACCTGCTCATGGCGTACTACGTCAAAGGATTTTCAAAACGAGCGATGGCGCGTAAAC 265457
Query 4040 GTCGA-GTGGATGAGGGGATGATAAGGGCAAAATTACTGATTGCAGAAGGCTTTATTGAC 4098
| | || | ||| || || | || | || || || || ||||| ||
Sbjct 265458 GCAAATGTTCAGAAGGCTAT-ATCCGTATGCGTTTGCAAATCGCGGAGGGATTTATCGAG 265516
Query 4099 GGTTGTTTATCGCTGCTCGCCGTGCGATTAGACATGGACCCGGAGGTTAAAATTTATTCG 4158
|| || | ||| |||| | || | |||||||| || || || ||||| | ||
Sbjct 265517 GGCTGCCTGTCGATGCTAGATACACGGCTGGACATGGATCCAGAAGTGAAAATCTTCCCG 265576
Query 4159 CCACaaaaaagtaaaaaaaGGATTAGTGCGGTCCGCAAAAAGTTTGGTAATATG 4212
| ||||||||| |||||| | |||| ||| | |||| |||| || |||| ||
Sbjct 265577 TCGCAAAAAAGTGAAAAAACGCTTAGCGCGCTACGCACAAAGCCTGCTAATGTG 265630
Score = 102 bits (112), Expect = 2e-17
Identities = 218/326 (67%), Gaps = 0/326 (0%)
Strand=Plus/Plus
Query 2637 TTTACTGAAATTTCCTTTGCTGAAAAAGATGATGATCTGGCACGTAAGATGCGGGGCTGT 2696
||||| ||||| ||| |||| |||| ||||| || || | || || |||||||| |
Sbjct 264288 TTTACCGAAATCTCCCTTGCGGAAAGGGATGAGGACCTTTCGCGAAAAATGCGGGGGCGC 264347
Query 2697 CTGGTGGCAGAAATTAGCGAATTACGCGGACTTAATACCAAAGAACTGGAATCTATCAAA 2756
|||| | ||||| |||| | || || || || |||| || | || || |||||
Sbjct 264348 TTGGTTGGGGAAATCTCCGAACTGCGTGGCCTGAACTCCAAGGAGATTGAGTCCATCAAG 264407
Query 2757 GCCTTTGTCACTCGGACACATGAAAAGTGGATCCCCAAGTTTAAAGAATTCGCCACCCAA 2816
|| || | ||||| || |||||| ||| | ||||| | ||||||||||| ||
Sbjct 264408 GCGTTCATTACTCGTACGCATGAAGTCTGGGTGCCCAAATACCGTGAATTCGCCACACAG 264467
Query 2817 TTTCCCAGACGCTCATTGAGTATTGGTACTACGAATGAAGATGAATTTTTAGGTGATAAA 2876
|| | | || ||| | || ||||| ||| | || || ||| | | || ||
Sbjct 264468 TTCTCGCGCCGTCTGGTGATGTTCGGCACTACCAATCAGGAAGAGTTTCTGGCCGACGAA 264527
Query 2877 ACCGGTAATCGGCGTTGGCTGCCCGTTGAAGTTGGAAAAATGGATGTAGAAGGTATCAAA 2936
||||| || ||||||||| | || | ||||| || ||| | |||| | ||||||
Sbjct 264528 ACCGGCAACCGGCGTTGGTTACCGCTGCGCGTTGGTAAGATGCGTTTAGACGACATCAAA 264587
Query 2937 AAGGATGTCATTCAACTTTGGGCAGA 2962
||||| || || || ||||| ||
Sbjct 264588 CGCGATGTGATGCAGCTATGGGCCGA 264613
>seq1308
Length=4734
Score = 102 bits (112), Expect = 2e-17
Identities = 115/153 (75%), Gaps = 2/153 (1%)
Strand=Plus/Minus
Query 35778 CCTAAACACGGGAGGATTAATTATGGGTCAGGTTGCATTTGATGCACTACAAGCATCGGA 35837
|||| ||| |||||||| ||||| || |||||||||||| || | || || || ||
Sbjct 3937 CCTAGACA--GGAGGATTTTCCATGGGCCAAGTTGCATTTGATACATTGCAGGCGTCAGA 3880
Query 35838 AGAACTAGAAAGTGCTGGTATTTCTAGAGAAAAGGCTAGAGCTATCTCACTGGTAGTACG 35897
||| || |||| ||||| || |||||||| | || || || || || || || |||||
Sbjct 3879 AGAGCTTGAAACCGCTGGCATCTCTAGAGAGCAAGCCAGGGCGATTTCGCTCGTCGTACG 3820
Query 35898 CAAATCGCATGAGGTTGCTGATGTAGCGACAAA 35930
||| || ||||| || |||||||| || || ||
Sbjct 3819 CAAGTCTCATGAAGTGGCTGATGTGGCTACTAA 3787
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127450187695548
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |