Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_013059.1
Length=40975
Score E
Sequences producing significant alignments: (Bits) Value
seq748 105 2e-18
>seq748
Length=7821
Score = 105 bits (116), Expect = 2e-18
Identities = 233/347 (67%), Gaps = 2/347 (1%)
Strand=Plus/Minus
Query 25448 TCCAAGCATTTGCATCACACCATTAATTCCAACATTAATCTCAGTGGTGTAGCGGTCTTG 25507
||||||||||||||| |||||||||||| ||| |||| || ||| | || |||||
Sbjct 7288 TCCAAGCATTTGCATAGAACCATTAATTCCTACAATAATTTCTGTGATATATTTATCTTG 7229
Query 25508 CCCTGTCTGGTCTTGCCACTTTCTGGTTCTCAGCATTCCCTCGAAATAAACCTGATCACC 25567
|| | ||||||||||| ||||| || || |||| || | ||| || ||| ||
Sbjct 7228 ACCATTTTGGTCTTGCCATTTTCTAGTCTGCAAGCTTCCTTCAATATATACTTGAGAGCC 7169
Query 25568 TTTTTTCACATACTGCCCTACGACTTCAGCAAGTTTCCCAACTACGGCAACACGATGCCA 25627
|||| | ||| | || | | ||| || | ||| |||| || | | | |||||
Sbjct 7168 TTTTCGTAAATATTCTCCGGCTATTTCTGCTAATTTTCCAAATAAAACTATTCTGTGCCA 7109
Query 25628 TTCAGTCTGCTCCTTTTGTTCGCCAGTCTGTTTATCTCGCCACTGCTCTGATGTAGCGAC 25687
|||||| | || || || || || | ||| || ||||| ||| |||||||| |
Sbjct 7108 TTCAGTTTTTTCTTTCATGTCTCCGGTATTTTTGTCACGCCAGCTCTCAGATGTAGCAAG 7049
Query 25688 TGTCAGGTTAGCGAACGC-CGTCCCTGATGGTGAATAACGAACCTCCGGGTCTTGCCCGA 25746
|| | || || | || | ||| | | ||| |||||| | || || | |||||| |
Sbjct 7048 CGTGATATTCGCAACAGCACTTCCGTTA-GGTATATAACGTATATCTGGATTTTGCCCTA 6990
Query 25747 CCCGGCCTAAGATGATCACCTTATTTACGCCTCTACTAGCCATTTAT 25793
| || | | || || |||||||| ||||| |||| |||| ||
Sbjct 6989 AATGTCCAATTAAAATTACTTTATTTACACCTCTGCTAGTCATTGAT 6943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130995715024044
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |