Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_013059.1 Length=40975 Score E Sequences producing significant alignments: (Bits) Value seq748 105 2e-18 >seq748 Length=7821 Score = 105 bits (116), Expect = 2e-18 Identities = 233/347 (67%), Gaps = 2/347 (1%) Strand=Plus/Minus Query 25448 TCCAAGCATTTGCATCACACCATTAATTCCAACATTAATCTCAGTGGTGTAGCGGTCTTG 25507 ||||||||||||||| |||||||||||| ||| |||| || ||| | || ||||| Sbjct 7288 TCCAAGCATTTGCATAGAACCATTAATTCCTACAATAATTTCTGTGATATATTTATCTTG 7229 Query 25508 CCCTGTCTGGTCTTGCCACTTTCTGGTTCTCAGCATTCCCTCGAAATAAACCTGATCACC 25567 || | ||||||||||| ||||| || || |||| || | ||| || ||| || Sbjct 7228 ACCATTTTGGTCTTGCCATTTTCTAGTCTGCAAGCTTCCTTCAATATATACTTGAGAGCC 7169 Query 25568 TTTTTTCACATACTGCCCTACGACTTCAGCAAGTTTCCCAACTACGGCAACACGATGCCA 25627 |||| | ||| | || | | ||| || | ||| |||| || | | | ||||| Sbjct 7168 TTTTCGTAAATATTCTCCGGCTATTTCTGCTAATTTTCCAAATAAAACTATTCTGTGCCA 7109 Query 25628 TTCAGTCTGCTCCTTTTGTTCGCCAGTCTGTTTATCTCGCCACTGCTCTGATGTAGCGAC 25687 |||||| | || || || || || | ||| || ||||| ||| |||||||| | Sbjct 7108 TTCAGTTTTTTCTTTCATGTCTCCGGTATTTTTGTCACGCCAGCTCTCAGATGTAGCAAG 7049 Query 25688 TGTCAGGTTAGCGAACGC-CGTCCCTGATGGTGAATAACGAACCTCCGGGTCTTGCCCGA 25746 || | || || | || | ||| | | ||| |||||| | || || | |||||| | Sbjct 7048 CGTGATATTCGCAACAGCACTTCCGTTA-GGTATATAACGTATATCTGGATTTTGCCCTA 6990 Query 25747 CCCGGCCTAAGATGATCACCTTATTTACGCCTCTACTAGCCATTTAT 25793 | || | | || || |||||||| ||||| |||| |||| || Sbjct 6989 AATGTCCAATTAAAATTACTTTATTTACACCTCTGCTAGTCATTGAT 6943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130995715024044