Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq245 86.0 8e-12 >seq245 Length=384531 Score = 86.0 bits (94), Expect = 8e-12 Identities = 125/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 175927 ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATATT 175986 ||||||||| || | | || || ||||||||||| | |||||| | ||||| ||||| Sbjct 259148 ATCTTTGCCGCCAGTTAAGCGGGTACCAAATTGACCTCTTGGCTCCAACAGATTTATATT 259207 Query 175987 GTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGT-ATCCGCGAGGGAGACTTCAC 176045 || || |||| ||| | | ||||| |||| || || || || | || ||||||| Sbjct 259208 ATTCGAACCCACATAATTTTGTGCCAAACTGACTATGGTCATTTGC-AAAGACACTTCAC 259266 Query 176046 CGTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTCA 176099 ||||||| || || ||| | |||||||| | | | || ||||| || |||| Sbjct 259267 CGTGATGATAAGCGGACATTTCCGCCACGGATCCAGATAATTGCGCAACTTTCA 259320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613493963582160