Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_013594.1 Length=37235 Score E Sequences producing significant alignments: (Bits) Value seq367 161 2e-35 >seq367 Length=84945 Score = 161 bits (178), Expect = 2e-35 Identities = 289/416 (69%), Gaps = 6/416 (1%) Strand=Plus/Plus Query 35136 ATTGGCTATGTAAGGGTATCAACAAATGACCAGAATACAGACCTGCAACGAAACGCTCTT 35195 || |||||| | ||||| |||| |||||| || || || || | || ||||| | ||| Sbjct 11719 ATAGGCTATATGAGGGTGTCAAAAAATGAACAAAACACCGATTTACAGCGAAAATCACTT 11778 Query 35196 GTTTGTGCAGGATGTGAACAAATATTTGAAGATAAATTAAGCGGAACAAG-GA-CAGACA 35253 ||||| || ||||| || || ||||| |||||| | ||||||| || || |||| Sbjct 11779 ATTTGTACAAATTGTGAGCAGATTTTTGAGGATAAAATCAGCGGAAAAACAGATCAGA-- 11836 Query 35254 GACCTGGATTAAAACGCGCGTTAAAGCGCCTTCAAAAAGGTGACACACTGGTTGTCTGGA 35313 |||| |||||||||||||| |||| || || |||||||| | | ||||||| Sbjct 11837 GACCCAGATTAAAACGCGCGCTAAATGCACTGAAATCGGGTGACACCTTAATCGTCTGGA 11896 Query 35314 AACTGGATCGCCTCGGGCGAAGCATGAAACATCTGATTTCCCTCGTCGGGGAACTACGGG 35373 | |||||| | || || || ||||| |||||| ||||| | | | |||| | Sbjct 11897 AGCTGGATAGACTGGGTCGCAGCATTAAACATTTGATTACTTTAATATCCAAACTGGAAG 11956 Query 35374 AGCGAGGGATTAATTTTCGCAGTCTTACCGACAGCATAGACACATCTTC-TCCAATGGGG 35432 | ||| ||| |||||| ||| | || || ||| || || ||| | ||| | || Sbjct 11957 ATGAAGGTATTCATTTTCATAGTTTGACGGATGCCATTGATACCTCTACGTCCGCT-GGC 12015 Query 35433 CGTTTTTTCTTCCACGTTATGGGTGCCCTGGCTGAAATGGAACGAGAACTAATCATCGAG 35492 ||||||||||| || || ||| |||| |||| ||||||| || ||||| || | ||| Sbjct 12016 CGTTTTTTCTTTCATGTGATGAGTGCGTTGGCGCAAATGGAGCGGGAACTCATTGTTGAG 12075 Query 35493 CGAACGATGGCTGGACTTGCTGCCGCCAGAAATAAAGGCCGTATTGGTGGGCGACC 35548 || || | ||| || | || || || |||| | || ||||| || || |||| Sbjct 12076 CGTACTAAGGCAGGTTTAGCCGCAGCAAGAAGCAGGGGACGTATCGGGGGTAGACC 12131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119027960323164