Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq162 87.8 3e-12 >seq162 Length=626193 Score = 87.8 bits (96), Expect = 3e-12 Identities = 156/226 (69%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 203837 GTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATG 203896 || || || || || ||||| |||| || | || ||| | |||| || || ||||| Sbjct 500938 GTTTTATCGACTGTAAACTGTATGGGATTTGCTGCTGGCTTCGTTCTTAGGTAATACATA 500879 Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGC--TCACGT 203954 ||||| |||| ||| | ||| || || | || || ||||| | ||||| | || Sbjct 500878 CCGGTTTTTAAGCCGACTTTCCAACCATAAAAATGTATAGAAGATAATTTGCCATAAC-- 500821 Query 203955 TGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTG 204014 | || | || | || ||||| | || |||||||||||||| |||| | ||||| Sbjct 500820 TAGGTTGAGCTACATGTATGTTAAATGATTGGCTTTGGTCGATAAAAGCTCCGCGATCAA 500761 Query 204015 CGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 | ||||| ||||| | | |||| |||||| ||||| ||||| || Sbjct 500760 CAGCCATGTTGATGGTTGACTTCACCGAAATTTCCCAAACCGTTTT 500715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795138044526560