Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq245 82.4 9e-11 >seq245 Length=384531 Score = 82.4 bits (90), Expect = 9e-11 Identities = 160/228 (70%), Gaps = 10/228 (4%) Strand=Plus/Plus Query 167538 ATCCTTGCCACCCATGAGGCGTGTACCAAATTGACCACATGGCTCGAGAAGATTGATGTT 167597 ||| ||||| || | | ||| |||||||||||||| | |||||| | ||||| || || Sbjct 259148 ATCTTTGCCGCCAGTTAAGCGGGTACCAAATTGACCTCTTGGCTCCAACAGATTTATATT 259207 Query 167598 ATTCGACCCCGTATAATCGTTGGCCAACTTGACGATCGT-TTCAGCGAGGGAAACTTCGC 167656 |||||| ||| ||||| | ||||| |||| || || | || | || ||||| | Sbjct 259208 ATTCGAACCCACATAATTTTGTGCCAAACTGACTATGGTCATTTGC-AAAGACACTTCAC 259266 Query 167657 CGTGGTGGTAAGCACTCTTTTCAGCCACATATGCTGCCAACTGTGCAACCTTCA--TCTC 167714 |||| || ||||| | |||| ||||| || | | || || ||||| |||| |||| Sbjct 259267 CGTGATGATAAGCGGACATTTCCGCCACGGATCCAGATAATTGCGCAACTTTCACTTCTC 259326 Query 167715 ATCTTTGAGATTCTTTTGGAAACA--TGAATACATAACCTTGCGTTGA 167760 | || | | | ||| |||||| ||||| || ||||| || ||| Sbjct 259327 GT-TTATCGTTACGTTT-GAAACAAGTGAAT--ATTACCTTACGCTGA 259370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588963292842800