Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq162 87.8 2e-12
>seq162
Length=626193
Score = 87.8 bits (96), Expect = 2e-12
Identities = 234/351 (67%), Gaps = 5/351 (1%)
Strand=Plus/Minus
Query 106268 AAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTA 106327
||||| | | | || || | ||||| || || |||||||| || | || || | ||||
Sbjct 500215 AAAATCAGTGCGTCAGCAAATCCTTGGACGCCTAAACCAATTGGACGATGACGAAAATTA 500156
Query 106328 GACTTTCGCGCAGTCT-CAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTT 106386
||||||| | | |||||| ||| |||| | || || | | ||| || || ||
Sbjct 500155 GACTTTCTGGTTTCCGGCAACGG-ATAGTAATTGATATCGATTATTTTGTTGAGGTTCTT 500097
Query 106387 GGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATT 106446
|| | || ||||| | ||| | ||||| | | ||||| | || ||| | | ||
Sbjct 500096 TGTTATAAGCTTTGCAACTTCTTTGAGTTTGTGAAAATCATAT-TGTTTATCTGT-CGTT 500039
Query 106447 GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 106506
||| || | | || |||||||| ||||||||||| || | || || ||
Sbjct 500038 -ACAAACATATTCAACGCAATTGATGCTAAATTGCAAACTGCTATTTCTTCAGCCGACGT 499980
Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566
|| || | ||||||||||||||||| | || || || || | ||||| ||| ||
Sbjct 499979 ATATTCGACGATTTCTGTACACAAGTTACTGCATTTTATAGTGCCAACATTCTGTTGATT 499920
Query 106567 ACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTC 106617
||| || || || ||||| ||||| |||||||| || || || |||||
Sbjct 499919 ACTTTTGCGATTACAAGCATCTTTGTAAAGCATGTAAGGAGTTCCGGTCTC 499869
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589968071164240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |