Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_015293.1 Length=30651 Score E Sequences producing significant alignments: (Bits) Value seq748 138 2e-28 >seq748 Length=7821 Score = 138 bits (152), Expect = 2e-28 Identities = 190/266 (71%), Gaps = 0/266 (0%) Strand=Plus/Minus Query 2001 ACAACAATTTCAGTGGTGTACTTTTCTTGACCTTGTTGGTCAGTCCATTTGCGGGTTTTT 2060 |||| |||||| ||| | || || |||||||| | |||||| |||||| | || | Sbjct 7257 ACAATAATTTCTGTGATATATTTATCTTGACCATTTTGGTCTTGCCATTTTCTAGTCTGC 7198 Query 2061 AACTTGCCTTCAATGTATAGCTTACTACCCTTACGTACATACTCGCCGATTATTTCAGCT 2120 || | |||||||| |||| | | || || |||| ||| || ||| |||||| ||| Sbjct 7197 AAGCTTCCTTCAATATATACTTGAGAGCCTTTTCGTAAATATTCTCCGGCTATTTCTGCT 7138 Query 2121 AACTTTCCAAAAACAACAATTCTGTGCCACTCGGTTTCTTCTTTTGGCTCGCCAGTGCTT 2180 || |||||||| | ||| ||||||||||| || |||| |||||| || || || || Sbjct 7137 AATTTTCCAAATAAAACTATTCTGTGCCATTCAGTTTTTTCTTTCATGTCTCCGGTATTT 7078 Query 2181 TTATCCTTCCATTTTTCGCTAGTTGCTAGAGTTAGGTTTGCCACTGCATTTCCGTTAGGT 2240 || || ||| | || || || || || | || || || ||| ||||||||||| Sbjct 7077 TTGTCACGCCAGCTCTCAGATGTAGCAAGCGTGATATTCGCAACAGCACTTCCGTTAGGT 7018 Query 2241 ATGTAACGAATTTCTGGATCTTGACC 2266 || ||||| || ||||||| ||| || Sbjct 7017 ATATAACGTATATCTGGATTTTGCCC 6992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97959592154556