Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq116 93.3 3e-14
seq32 82.4 5e-11
>seq116
Length=862150
Score = 93.3 bits (102), Expect = 3e-14
Identities = 152/217 (70%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829
|||||||| || | ||| ||||||||||||||| ||||| || || | || |||
Sbjct 481866 AAAACCAAATGGAGTGTCGATTCTTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATTT 481807
Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889
|||| |||||| || ||||| || | ||||| || ||| | || || || || || ||
Sbjct 481806 TCCAACTGTTTGCCAGCAAAGATCAAACGTTGTTGATCTGGTGGGACTCCTTCTTTATCT 481747
Query 34890 CTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGG 34947
||| || ||| || || || || | || | |||||| || | ||| || |
Sbjct 481746 TGAATTTTAGTTTTAAC--ATTCTCAATAGTGTCGGATGGCTCAACCTCCAAGGTGATAG 481689
Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
|||| || || | |||||||| ||||||||||| ||
Sbjct 481688 TTTTCCCAGTCAATGTCTTCACGAAGATCTGCATTTT 481652
>seq32
Length=1919080
Score = 82.4 bits (90), Expect = 5e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
|||||| ||||| ||||| || || | | || |||| |||| || ||||| || ||
Sbjct 39228 TTCTTTTTGAATATTATAATCGGACAATGTGCGGCCATCTTCCAATTGCTTTCCAGCGAA 39287
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| | |||||||||||| | || | ||||| ||||| |||||| ||| ||
Sbjct 39288 AATCAATCGTTGCTGGTCGGGTGGAATTCCCTCTTTGTCCTGAATCTTGGCTTTTACATT 39347
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| | || | || || || || || | || ||||| || ||||| || || || ||
Sbjct 39348 TTCGATAGTGTCCGAGGGTTCGACCTCAAGAGTGATGGTCTTGCCCGTTAGGGTTTTTAC 39407
Query 34970 AAAGATCTGCATATT 34984
||| |||||||||||
Sbjct 39408 AAAAATCTGCATATT 39422
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324626771129328
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |