Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_016761.1 Length=38684 Score E Sequences producing significant alignments: (Bits) Value seq1715 129 1e-25 >seq1715 Length=1042 Score = 129 bits (142), Expect = 1e-25 Identities = 181/254 (71%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 19234 GTAGATGATGTCATTAAGATCGGGCAGGGCATCCCGCTGAATGCGGTAGAAGGTAAGAGC 19293 || ||||| | |||||| | |||||| |||||||| || ||||| || |||||| Sbjct 1042 GTTGATGACGCCATTAAACTGTTGCAGGGTATCCCGCTCAACGCGGTCGAGGGTAAGCCG 983 Query 19294 GAGCAAACTGGTGGTGATCTGGTTAAGCTTGGAAAAGGTCTGACACCTGGTGCCAACATC 19353 || ||||| || || ||||| || ||| ||| || || ||| || || || | Sbjct 982 GAACAAACCGGGGGCGATCTCGTCAAGTTTGCCAAGGGCATGATCCCAGGGCAAAATTTA 923 Query 19354 TGGTACCTGAAGGCTGCGCTTGATCATATGATCTTTAACCAGATGCAGGAGTATTTTTCC 19413 ||||| || || | |||||| |||||| ||||||| ||| | ||||| ||||| Sbjct 922 TGGTATACCAAAGCGGTGCTTGACCATATGGTCTTTAATCAGCTACAGGAAATCTTTTCA 863 Query 19414 CCTGGCTATCTGCGCAAGATGGAGCAGCGTTCGAAGAAAGAATTTAACCAGACATACTGG 19473 || || ||| | ||| ||||| ||||||| |||||| ||||| || || |||||| Sbjct 862 CCGGGGTATTTACGCCGAATGGAAAAGCGTTCCCGGAAAGAGTTTAATCAAACCTACTGG 803 Query 19474 TGGCGACCTCAGGA 19487 ||||| || ||||| Sbjct 802 TGGCGTCCGCAGGA 789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123664665286152