Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_019445.1 Length=44784 Score E Sequences producing significant alignments: (Bits) Value seq429 91.5 4e-14 >seq429 Length=112147 Score = 91.5 bits (100), Expect = 4e-14 Identities = 151/208 (73%), Gaps = 9/208 (4%) Strand=Plus/Minus Query 34164 TTGGTGGTGAACTGTGCAGGGTTGGCGTAACCGGCTAA-AAGGACCCGGCGCACCTTTCG 34222 ||||||| || ||| |||||||| ||||||||| |||||||||||| |||| || Sbjct 6407 TTGGTGGCGAGCTGAACAGGGTTGAGACTACCGGCTAAGAAGGACCCGGCGAGCCTTGCG 6348 Query 34223 GTGCCCCCACACAGCCCACCATAATACGAATGTGGCCGTGCTATACGCATaaaaaaa--C 34280 | |||||| ||||||||||| || | || ||| || || ||||||||||||| Sbjct 6347 GCTCCCCCATCCAGCCCACCATTATTCTGATATGG-CGGACT-GACGCATAAAAAAAACA 6290 Query 34281 CGCTTGCGCGGTG-AATGCGCCTT-TTAGTAATCCGGGACGCCAATCCCGGCACTGGATT 34338 |||| || ||| ||||||||| |||| | ||||| ||| |||| ||| || | Sbjct 6289 CGCTCTCGGCGTGTTATGCGCCTTCTTAGATAACCGGGGTCTCAAACCCGACACCTGAAT 6230 Query 34339 TTTCCAGTGCCCGATT-ACTATGGCACA 34365 || | ||| | |||| ||||| || || Sbjct 6229 TTGCAGGTG-CGGATTGACTATAGCGCA 6203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143184265199352