Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_019501.1 Length=39646 Score E Sequences producing significant alignments: (Bits) Value seq748 140 8e-29 >seq748 Length=7821 Score = 140 bits (154), Expect = 8e-29 Identities = 238/345 (69%), Gaps = 0/345 (0%) Strand=Plus/Minus Query 4177 CCAAGCATTTGCATGGTTCCACCAACGCCCACGATGACTTCGGTAGTGAACCTATCCTGT 4236 |||||||||||||| | ||| || || || || | ||| || | | |||| || Sbjct 7287 CCAAGCATTTGCATAGAACCATTAATTCCTACAATAATTTCTGTGATATATTTATCTTGA 7228 Query 4237 CCGCTTTGATCCTGCCATTTTCTTGTCCGCAATTTTCCTTCAAGATAAACCTCAGAGCCT 4296 || |||| || ||||||||||| ||| |||| ||||||||| ||| || | ||||||| Sbjct 7227 CCATTTTGGTCTTGCCATTTTCTAGTCTGCAAGCTTCCTTCAATATATACTTGAGAGCCT 7168 Query 4297 TTTCGCAGATATTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATTACCACGCGGTGCCAC 4356 ||||| | |||||| | ||| |||||||| | ||| || | || | | |||||| Sbjct 7167 TTTCGTAAATATTCTCCGGCTATTTCTGCTAATTTTCCAAATAAAACTATTCTGTGCCAT 7108 Query 4357 TCCGTCTGCTCCTTTTGCTCTCCAGTTTGCTTATCACGCCATTGTTCTGACGTAGCAACT 4416 || || | || || ||||| || | || |||||||| || || ||||||| Sbjct 7107 TCAGTTTTTTCTTTCATGTCTCCGGTATTTTTGTCACGCCAGCTCTCAGATGTAGCAAGC 7048 Query 4417 GTAAGGTTTGCAAATGCCGTTCCTGATGGTGAATATCTGATTTCTGGATCATGCCCAAGG 4476 || | || |||| || |||| ||| ||| | || ||||||| ||||| | Sbjct 7047 GTGATATTCGCAACAGCACTTCCGTTAGGTATATAACGTATATCTGGATTTTGCCCTAAA 6988 Query 4477 CGACCAATAATGATCACCTTATTTACGCCTCTGCTTGCCATTTAT 4521 | ||||| | || || |||||||| |||||||| | |||| || Sbjct 6987 TGTCCAATTAAAATTACTTTATTTACACCTCTGCTAGTCATTGAT 6943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126743002190496