Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_019521.1 Length=219372 Score E Sequences producing significant alignments: (Bits) Value seq771 122 1e-22 >seq771 Length=5339 Score = 122 bits (134), Expect = 1e-22 Identities = 150/203 (74%), Gaps = 8/203 (4%) Strand=Plus/Minus Query 173245 CTTCAGGTGTTTTACCAGTAATGAAAATCCTTGAAGATGCTTTTTCATATGCTAATCAAT 173304 |||| || || |||| | ||||||||| | |||||||||||||| ||||||||||||| Sbjct 2600 CTTCCGGAATTATACCGATTATGAAAATCTTAGAAGATGCTTTTTCTTATGCTAATCAAT 2541 Query 173305 TAGGACAACGTCCAGGTGCTGGAGCTGCTTATATCAAT----ATCTTCCATTCAGATGTT 173360 |||| ||| | ||| |||||||| | ||| | || ||| ||| | | || || Sbjct 2540 TAGGTGCACGACAAGGAGCTGGAGCCGTATATTTACATGCTCATCATCC--TGATATTTT 2483 Query 173361 GAAGAATTTCTAGATTCTAAGAAAATCAACGCTGACGAAAAATCACGTCTTAAATCGCTT 173420 |||| ||| ||||| |||| ||| || ||||| |||||| | | | ||| | || Sbjct 2482 GAAG--TTTTTAGATACTAAAAAAGAAAATGCTGATGAAAAAACCAGAATAAAAACCCTA 2425 Query 173421 TCGTTAGGTGTTATCGTTCCTGA 173443 || |||||||||||| ||||||| Sbjct 2424 TCTTTAGGTGTTATCATTCCTGA 2402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701847257318720