Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_019709.1
Length=41567
Score E
Sequences producing significant alignments: (Bits) Value
seq367 237 4e-58
>seq367
Length=84945
Score = 237 bits (262), Expect = 4e-58
Identities = 332/463 (72%), Gaps = 2/463 (0%)
Strand=Plus/Plus
Query 33215 TGCCAGGCATATGCCAGTAAGTGGCCTGAACGCCTTCAAAAAGGTGGCGGACTGGTCATG 33274
||| | || ||||||| | ||||||||||||||| | |||||||| |||| |||
Sbjct 7090 TGCAATGCCTATGCCACCCATTGGCCTGAACGCCTTAAGCGTGGTGGCGGTTTGGTGATG 7149
Query 33275 TGTGGTAAGCCTGGAACTGGAAAGAACCACCTTGCACTGGCTATCGCTAGGCACGCCATT 33334
||||||||||| || || || ||||| || || |||||| | || || | |||| ||
Sbjct 7150 TGTGGTAAGCCCGGTACAGGCAAGAATCATCTGGCACTGTCGATTGCGAAACACGTTATC 7209
Query 33335 ATCGAGCATCAAAGCTCTGTGATATTTACCACTGCGTTGAAAATTGCCAGAGAGTACAAA 33394
| ||| |||||||| || | | |||| || || | ||| ||||||| | |||| |||
Sbjct 7210 AACGAACATCAAAGTTCAGCGCTATTCACGACAGTTTTGCGAATTGCCCGTGAGTTTAAA 7269
Query 33395 TCAACATGGTCTAAGGCCGCAACCAGAACTGAAGAAGAAGTCATTAGGCAATTTACGCAT 33454
||||| ||| || ||| | | |||| || ||||| | || | ||| ||
Sbjct 7270 TCAACTTGGGGCAAAAACGCGGAGTGCTCAGAAGCTGATGTCATCAAGCGCTATACCCAG 7329
Query 33455 CCTGACTTGTTAATAATCGATGAGGTTGGCGTGCAGTTCGGCAGTGATGCTGAAAAGCTA 33514
||||||||| | |||||||| ||||| ||||| |||||||| || || || |||||| |
Sbjct 7330 CCTGACTTGCTCATAATCGACGAGGTAGGCGTTCAGTTCGGGAGCGAAGCGGAAAAGATG 7389
Query 33515 ATCATGTTCGAAATTATCAACACCAGATATGAATACATGAAGCCAACAATCCTGATTAGT 33574
|| | ||||| |||| ||||| | || || |||||||||||| || | || ||
Sbjct 7390 ATTTTATTCGAGGTTATTAACACGCGTTACGAGAGCATGAAGCCAACGATAATTATCAGC 7449
Query 33575 AATCAGAGCAAAG-ATGAACTGTCTGCATTCATTGGTGAGCGTGTTATTGACAGGATGAA 33633
|||| | ||| | | |||||| | | ||| || || |||| ||||| ||| | |||||
Sbjct 7450 AATCTG-GCATTGAACGAACTGGCCGGATTTATCGGATAGCGCGTTATAGACCGTATGAA 7508
Query 33634 TGATGGCGGCGGGTGCACTCTTGCGTTTACATGGGATAGTTAC 33676
|| || ||||| |||||| | |||| || |||| ||||||
Sbjct 7509 CGACGGTGGCGGTTGCACTTTGACGTTCACGTGGGGCAGTTAC 7551
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132890076195948
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |