Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_019709.1 Length=41567 Score E Sequences producing significant alignments: (Bits) Value seq367 237 4e-58 >seq367 Length=84945 Score = 237 bits (262), Expect = 4e-58 Identities = 332/463 (72%), Gaps = 2/463 (0%) Strand=Plus/Plus Query 33215 TGCCAGGCATATGCCAGTAAGTGGCCTGAACGCCTTCAAAAAGGTGGCGGACTGGTCATG 33274 ||| | || ||||||| | ||||||||||||||| | |||||||| |||| ||| Sbjct 7090 TGCAATGCCTATGCCACCCATTGGCCTGAACGCCTTAAGCGTGGTGGCGGTTTGGTGATG 7149 Query 33275 TGTGGTAAGCCTGGAACTGGAAAGAACCACCTTGCACTGGCTATCGCTAGGCACGCCATT 33334 ||||||||||| || || || ||||| || || |||||| | || || | |||| || Sbjct 7150 TGTGGTAAGCCCGGTACAGGCAAGAATCATCTGGCACTGTCGATTGCGAAACACGTTATC 7209 Query 33335 ATCGAGCATCAAAGCTCTGTGATATTTACCACTGCGTTGAAAATTGCCAGAGAGTACAAA 33394 | ||| |||||||| || | | |||| || || | ||| ||||||| | |||| ||| Sbjct 7210 AACGAACATCAAAGTTCAGCGCTATTCACGACAGTTTTGCGAATTGCCCGTGAGTTTAAA 7269 Query 33395 TCAACATGGTCTAAGGCCGCAACCAGAACTGAAGAAGAAGTCATTAGGCAATTTACGCAT 33454 ||||| ||| || ||| | | |||| || ||||| | || | ||| || Sbjct 7270 TCAACTTGGGGCAAAAACGCGGAGTGCTCAGAAGCTGATGTCATCAAGCGCTATACCCAG 7329 Query 33455 CCTGACTTGTTAATAATCGATGAGGTTGGCGTGCAGTTCGGCAGTGATGCTGAAAAGCTA 33514 ||||||||| | |||||||| ||||| ||||| |||||||| || || || |||||| | Sbjct 7330 CCTGACTTGCTCATAATCGACGAGGTAGGCGTTCAGTTCGGGAGCGAAGCGGAAAAGATG 7389 Query 33515 ATCATGTTCGAAATTATCAACACCAGATATGAATACATGAAGCCAACAATCCTGATTAGT 33574 || | ||||| |||| ||||| | || || |||||||||||| || | || || Sbjct 7390 ATTTTATTCGAGGTTATTAACACGCGTTACGAGAGCATGAAGCCAACGATAATTATCAGC 7449 Query 33575 AATCAGAGCAAAG-ATGAACTGTCTGCATTCATTGGTGAGCGTGTTATTGACAGGATGAA 33633 |||| | ||| | | |||||| | | ||| || || |||| ||||| ||| | ||||| Sbjct 7450 AATCTG-GCATTGAACGAACTGGCCGGATTTATCGGATAGCGCGTTATAGACCGTATGAA 7508 Query 33634 TGATGGCGGCGGGTGCACTCTTGCGTTTACATGGGATAGTTAC 33676 || || ||||| |||||| | |||| || |||| |||||| Sbjct 7509 CGACGGTGGCGGTTGCACTTTGACGTTCACGTGGGGCAGTTAC 7551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132890076195948