Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_019932.1 Length=29564 Score E Sequences producing significant alignments: (Bits) Value seq367 147 4e-31 >seq367 Length=84945 Score = 147 bits (162), Expect = 4e-31 Identities = 287/417 (69%), Gaps = 14/417 (3%) Strand=Plus/Minus Query 27224 CTGCCCCCGATGCGGCCTTTTTCCCGTGCCGCCGCCAGTCCTGCACGGGTACGCTCAACA 27283 || |||||||| || || | | ||| || || | ||||| |||||||||||| Sbjct 12128 CTACCCCCGATACGTCCCCTGCTTCTTGCTGCGGCTAAACCTGCCTTAGTACGCTCAACA 12069 Query 27284 ATCAGCTCGCGCTCCATTTCCGCCAGCGCCCCCATAACATGAAAAAAGAAGCGGCCCATT 27343 || || || |||||||||| ||||| ||| | ||| |||||||| || || ||||| Sbjct 12068 ATGAGTTCCCGCTCCATTTGCGCCAACGCACTCATCACATGAAAGAAAAAACGGCCAGCG 12009 Query 27344 GGCGTACTGGTATCAATGCTGTCGGTCAGGCTGCGGAAGTTTATTCCTTTTTCGCGCAGT 27403 | |||| |||||||||| || |||| || | || | || |||| || |||| Sbjct 12008 GACGTAGAGGTATCAATGGCATCCGTCAAACTATGAAAATGAATACCTTCATCTTCCAGT 11949 Query 27404 TCCTCAGTCAGCATAACCAGATGGCGCATGCTGCGGCCAAGACGATCCAGCTTCCACACC 27463 | | | ||| || ||| |||||||| || || | |||||||||||| || Sbjct 11948 TTGGATATTAAAGTAATCAAATGTTTAATGCTGCGACCCAGTCTATCCAGCTTCCAGACG 11889 Query 27464 ACCAGTGTGTCGCC----TTC-CTGCAGACAGCGCAGTGCTTTTTTCAGTCCCGGCCTGT 27518 | | ||||| || ||| |||| ||||| || |||| | || || | | Sbjct 11888 ATTAAGGTGTCACCCGATTTCAGTGCATTTAGCGC---GCGTTTT--AATCTGGG--TCT 11836 Query 27519 CTGA-CT-TTTTCCCGCTTATTCTGTCTTCAAAAATCAGTTCACAATTTGCGCTCTGCAG 27576 |||| || |||| ||||| ||| | || ||||||||| | |||||||||| | || Sbjct 11835 CTGATCTGTTTTTCCGCTGATTTTATCCTCAAAAATCTGCTCACAATTTGTACAAATAAG 11776 Query 27577 CGCGTTACGCTGCAAATCAGTGTTCTGGTCATTTGTTGACACCCTGATATAGCCAAT 27633 | || ||||| ||||| ||||| || |||||| |||||||||| |||||||| || Sbjct 11775 TGATTTTCGCTGTAAATCGGTGTTTTGTTCATTTTTTGACACCCTCATATAGCCTAT 11719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94481263448712