Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq162 105 3e-18
seq884 91.5 7e-14
>seq162
Length=626193
Score = 105 bits (116), Expect = 3e-18
Identities = 133/179 (74%), Gaps = 4/179 (2%)
Strand=Plus/Minus
Query 25921 CTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTC- 25979
||||||| | | ||| || ||||| || ||||||| |||||||||||||| | || |
Sbjct 499703 CTCAACTCTTTTCATGAACAAATCGGGGATCCACAGAGCATAAAATAAATCCCGTGCACG 499644
Query 25980 -TCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGC 26038
|| || || |||| |||| ||||||||| | | || || || |||||||||| |||
Sbjct 499643 GTC-TTCCTCCTTTCCCGT-ATTCTTTTTCAAGTTTAGAAATTCGAAAATATCTGCATGC 499586
Query 26039 CATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTA 26097
|| || ||||| || ||||||||| || | |||||| |||||||| || || ||
Sbjct 499585 CAAGGCTCTAAGTATATAGCAAAAGCCCCCGGACGTTTTCCACCACCTTGGTCGACATA 499527
>seq884
Length=3025
Score = 91.5 bits (100), Expect = 7e-14
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 36164 CTTGACTCATCATTCTTGCTTGTAAAGCAATTTTAGCTTCTCCACTTTCACCTTCTAACT 36223
|||||||||||||||||||| |||| | | | || || ||||||| |||| |
Sbjct 2517 CTTGACTCATCATTCTTGCTGCTAAACCTACATGTAAATCACCTATTTCACCATCTATTT 2458
Query 36224 CAGCTTTTGGAACCATAGCTGCAACACTATCTACGATAATTAAATCAACTTCTCTAGAGT 36283
| ||||||||| | |||||||||| |||||| |||||||||||||| ||| ||| |
Sbjct 2457 CGGCTTTTGGAGTTAAAGCTGCAACAGAATCTACTATAATTAAATCAACCGCTCCAGATT 2398
Query 36284 TTATTAAA 36291
| |||||
Sbjct 2397 TAGTTAAA 2390
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253034677145450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |