Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq162 84.2 3e-11
seq8 84.2 3e-11
>seq162
Length=626193
Score = 84.2 bits (92), Expect = 3e-11
Identities = 233/351 (66%), Gaps = 5/351 (1%)
Strand=Plus/Plus
Query 75905 GAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAG 75964
||||| ||||| || || ||||||||||| ||||||||||| || ||||| ||| ||
Sbjct 499869 GAGACCGGAACTCCTTACATGCTTTACAAAGATGCTTGTAATCGCAAAAGTAATCAACAG 499928
Query 75965 AATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAG 76024
||| | || || || || || || | || || ||||| | || || ||
Sbjct 499929 AATGTTGGCACTATAAAATGCAGTAACTTGTGTACAGAAATCGTCGAATATACGTCGGCT 499988
Query 76025 GATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAG 76084
|| || | || ||||||||||| |||||||| || | | || ||| || | | ||
Sbjct 499989 GAAGAAATAGCAGTTTGCAATTTAGCATCAATTGCGTTGAATATGTTTGT-AACG-ACAG 500046
Query 76085 ACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTA 76144
| || | ||||| | | ||||| | ||| | ||||| || | || || || ||
Sbjct 500047 ATAAACA-ATATGATTTTCACAAACTCAAAGAAGTTGCAAAGCTTATAACAAAGAACCTC 500105
Query 76145 AACCGAGTCATTGACAGAAATTTTTATCCCGTTG-AGACTGCGCGAAAGTCTAATATGCG 76203
||| | | || || | |||| ||| |||||| | | ||||||||||| | ||
Sbjct 500106 AACAAAATAATCGATATCAATTACTAT-CCGTTGCCGGAAACCAGAAAGTCTAATTTTCG 500164
Query 76204 ACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTT 76254
|| | || |||||||| || || ||||| | || || | | | |||||
Sbjct 500165 TCATCGTCCAATTGGTTTAGGCGTCCAAGGATTTGCTGACGCACTGATTTT 500215
>seq8
Length=3216730
Score = 84.2 bits (92), Expect = 3e-11
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374
|||||||| || || ||||| || || || | || || ||| | ||||| |||||
Sbjct 2009148 CCAGGTACTGGCAAAACCCTACTAGCAAAGGCGACTGCAGGAGAAGCTAATGTGCCATTT 2009089
Query 175375 ATCCAGTG-CTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGT 175433
||| | || ||||| | | || | || ||||||||||| |||||| | || ||
Sbjct 2009088 ATC-ACTGTCTCTGGTTCCGAATTCTTAGAAATGTTTGTTGGCGTGGGTCCATCGAGAGT 2009030
Query 175434 TCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGAT 175493
|||||| | |||| | | ||||| ||||| || || ||| |||| |||||||| ||
Sbjct 2009029 GCGCGATATGTTTGCATTGGCCCGTAAAAATGCTCCTTGCATTCTCTTTATTGATGAAAT 2008970
Query 175494 TGATGCGGTGGGC 175506
|| ||||| |||
Sbjct 2008969 AGACGCGGTAGGC 2008957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596556729010880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |