Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq35 91.5 4e-13 >seq35 Length=1782701 Score = 91.5 bits (100), Expect = 4e-13 Identities = 116/157 (74%), Gaps = 11/157 (7%) Strand=Plus/Plus Query 303627 TTGGGGCATATGTAAATTCATCTCATCACCGTCAAAATCAGCATTATACGGCTTTGTGTC 303686 ||| || | |||||||||||| |||||||| |||||||| |||||||| || || Sbjct 1405261 TTGCGGTACATGTAAATTCATTTCATCACCATCAAAATCTGCATTATATGGGGAAGTACA 1405320 Query 303687 CGCAACGTTCATCCGGAAAGTATCACCCT-GCATCA---TAACACGGGCTTTATGACACA 303742 | | ||||| ||||| ||| ||| | ||| || ||||||| ||||| || Sbjct 1405321 AGATAAATTCATACGGAATGTA-GACCATGGCAACACTTTAACACG------ATGACCCA 1405373 Query 303743 TCATAGACATTCTGTGTAGAGTTGGCTGACGATTGAA 303779 ||||| |||| |||| ||||| |||||||||||||| Sbjct 1405374 TCATACTCATTTTGTGCAGAGTAGGCTGACGATTGAA 1405410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471785051673662