Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_021534.1 Length=47552 Score E Sequences producing significant alignments: (Bits) Value seq748 80.6 8e-11 >seq748 Length=7821 Score = 80.6 bits (88), Expect = 8e-11 Identities = 188/279 (67%), Gaps = 5/279 (2%) Strand=Plus/Plus Query 33232 TATATGCCTTCTGGCGGCGCTGTGTGC-AATCTGTCTCTGGCAACATCAGAGCAGTGGAA 33290 ||||| ||| || | ||||| ||| ||| | | || || ||||| ||| ||| Sbjct 7013 TATATACCTAACGGAAGTGCTGT-TGCGAATATCACGCTTGCTACATCTGAGAGCTGGCG 7071 Query 33291 CGATAAAGCAACAGGGGAAAAGAAAGAGCAGACAGAATGGCATCGCGTGGTTATCTTCGG 33350 || ||| || || || | |||||| | || |||||||| | | ||| | || || Sbjct 7072 TGACAAAAATACCGGAGACATGAAAGAAAAAACTGAATGGCACAGAATAGTTTTATTTGG 7131 Query 33351 AAAGCTGGCAGAGGTGGCTGGCGAATACCTGCGCAAAGGCTCTCAGGTGTATGTAGAAGG 33410 ||| | ||||| | || || ||||| | || ||||||||||| || ||| | ||||| Sbjct 7132 AAAATTAGCAGAAATAGCCGGAGAATATTTACGAAAAGGCTCTCAAGTATATATTGAAGG 7191 Query 33411 AAAATTACGTACTCGCAAATGGACAGATCAAAGCGGTGTTGAAAAATACACTACTGAAAT 33470 || || | ||| | |||||| ||| |||| ||| || ||||| | || ||||| Sbjct 7192 AAGCTTGCAGACTAGAAAATGGCAAGACCAAAATGGTCAAGATAAATATATCACAGAAAT 7251 Query 33471 CGTCTTGCAGCCTATGAACGGCGTTATGCAAATGATTGG 33509 | ||| || || || || |||||||||| |||| Sbjct 7252 --TATTGTAG-GAATTAATGGTTCTATGCAAATGCTTGG 7287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152041683651768