Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_023574.1 Length=128546 Score E Sequences producing significant alignments: (Bits) Value seq771 104 2e-17 >seq771 Length=5339 Score = 104 bits (114), Expect = 2e-17 Identities = 237/357 (66%), Gaps = 0/357 (0%) Strand=Plus/Minus Query 68223 TATCATGTTTCCTTTTGAATATTGAAGATAATATGACGTCTATTGGGCGCTCAGTAAATT 68282 ||||||| || | || ||| |||||||||||| || ||||||||| | | ||| Sbjct 2756 TATCATGCTTTTTATTACGTATAGAAGATAATATGGAATCCATTGGGCGCGCGATTAATG 2697 Query 68283 CAGTTCTTCAATTGTCTAAAATGGGTGGTGGAGTTGGAATCAACTTAACTGATATCCGTC 68342 ||| | | ||| | ||||||| || || ||||| | | ||||| || | | Sbjct 2696 CAGCTTTGCAACTATCTAAAAGAGGAGGAGGAGTATCATTTTTATTAACAAATTTAAGAG 2637 Query 68343 CGTCAGGAGACCCTATCAAGGGTATTGAGAATATGGCTGATGGAGTTGTTCCAATCATGA 68402 ||||| | ||||| || |||| | ||| || ||| || | || || |||| Sbjct 2636 AATCAGGGGCACCTATTAAATATATTAAAAATCAATCTTCCGGAATTATACCGATTATGA 2577 Query 68403 AACTCTATGAAGATTCATTTTCATATGCCAATCAGTTGGGGACAAGAAATGGGGCAGGAG 68462 || ||| |||||| | ||||| ||||| ||||| || || || || | || || |||| Sbjct 2576 AAATCTTAGAAGATGCTTTTTCTTATGCTAATCAATTAGGTGCACGACAAGGAGCTGGAG 2517 Query 68463 TAACTTATCTCAATGTATTCCATAAAGATATTGTTAAATTCCTCTCTACaaaaaaaGAAA 68522 ||| | ||| ||| |||||| | || || | ||| |||||||||| Sbjct 2516 CCGTATATTTACATGCTCATCATCCTGATATTTTGAAGTTTTTAGATACTAAAAAAGAAA 2457 Query 68523 ATGCTGACGAAAAAGTTCGTGTTAAAACTCTTTCTCTCGGTGTTGTAGTTCCTGATA 68579 ||||||| |||||| | | ||||| || ||| | |||||| | ||||||||| Sbjct 2456 ATGCTGATGAAAAAACCAGAATAAAAACCCTATCTTTAGGTGTTATCATTCCTGATA 2400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 411213749679802