Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq69 91.5 2e-13 seq35 87.8 2e-12 >seq69 Length=1266197 Score = 91.5 bits (100), Expect = 2e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 23053 ATCATGGGGATGAATATAATTTTGATGGTCCAGGTCAAATTTTAGCTCATGCtttttttC 23112 ||||||| |||| ||||| ||||| ||||| || ||||||||||| ||||| || | || Sbjct 407359 ATCATGGCGATGGCTATAAATTTGACGGTCCTGGACAAATTTTAGCACATGCCTTCTATC 407418 Query 23113 CTGGTACTGGAAGAGGAGGAGATGCTCATTTTGAT 23147 | || |||| ||||||| ||||||||||| ||| Sbjct 407419 CGGGCGTTGGACGAGGAGGTGATGCTCATTTCGAT 407453 >seq35 Length=1782701 Score = 87.8 bits (96), Expect = 2e-12 Identities = 64/72 (89%), Gaps = 2/72 (3%) Strand=Plus/Minus Query 51988 CATATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAATCATATGGAG 52047 |||||||||| ||||||||||| |||||||||||||||||||| || ||||| ||||||| Sbjct 1405310 CATATAATGCAGATTTTGATGGTGATGAAATGAATTTACATGTACCGCAATC-TATGGAG 1405252 Query 52048 -CTACTGCTGAA 52058 ||| |||||| Sbjct 1405251 ACTAGAGCTGAA 1405240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635163896043280