Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq69 91.5 2e-13 seq35 91.5 2e-13 >seq69 Length=1266197 Score = 91.5 bits (100), Expect = 2e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 22382 ATCACGGAGATGGATATAATTTTGATGGTCCAGGTCAAATTTTAGCTCATGCTTTTTTCC 22441 |||| || ||||| ||||| ||||| ||||| || ||||||||||| ||||| || | | Sbjct 407359 ATCATGGCGATGGCTATAAATTTGACGGTCCTGGACAAATTTTAGCACATGCCTTCTATC 407418 Query 22442 CTGGTACTGGAAGAGGAGGAGATGCTCATTTTGATTTAGAAGAAAATTGG 22491 | || |||| ||||||| ||||||||||| ||| || || |||||| Sbjct 407419 CGGGCGTTGGACGAGGAGGTGATGCTCATTTCGATGACGACGAGAATTGG 407468 >seq35 Length=1782701 Score = 91.5 bits (100), Expect = 2e-13 Identities = 78/94 (83%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 50416 ATGAATTTAGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAAATGAATTTA 50475 ||||||||| || ||| |||||||||| ||||||||||| ||||||||||||||| Sbjct 1405332 ATGAATTTATCTTGTACTTCCCCATATAATGCAGATTTTGATGGTGATGAAATGAATTTA 1405273 Query 50476 CATGTTCCTCAATCATATGGAG-CTACTGCTGAA 50508 ||||| || ||||| ||||||| ||| |||||| Sbjct 1405272 CATGTACCGCAATC-TATGGAGACTAGAGCTGAA 1405240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628517639439360