Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_024369.2 Length=41569 Score E Sequences producing significant alignments: (Bits) Value seq748 156 1e-33 >seq748 Length=7821 Score = 156 bits (172), Expect = 1e-33 Identities = 250/354 (71%), Gaps = 5/354 (1%) Strand=Plus/Plus Query 38193 AATGGCAAGCAGAGGTGTAAACAAGGTGATCTTAATTGGTCACCTTGGTCAAGATCCAGA 38252 |||| | |||||||||||||| || || || |||||||| || | || ||| ||||||| Sbjct 6946 AATGACTAGCAGAGGTGTAAATAAAGTAATTTTAATTGGACATTTAGGGCAAAATCCAGA 7005 Query 38253 GGTGCGCTATCTACCAAGCGGCGGCGCAGTGGCAAACATCACAATAGCAACGTCTGAGGT 38312 | || ||| |||| | ||| | || || || || ||||| | || || |||||| Sbjct 7006 TATACGTTATATACCTAACGGAAGTGCTGTTGCGAATATCACGCTTGCTACATCTGAGAG 7065 Query 38313 TTGGCGGGATAAGCAAACCGGACAGCCAAAAGAGAAAACAGAGTGGCACCGAGTTACTTT 38372 ||||| || || | |||||| | ||||| ||||| || |||||| || | ||| Sbjct 7066 CTGGCGTGACAAAAATACCGGAGACATGAAAGAAAAAACTGAATGGCACAGAATAGTTTT 7125 Query 38373 GTTTGGGAAGCTGGCTGAAGTTGCTGGCGAATACCTTCGAAAAGGATCTCATGTTTATAT 38432 ||||| || | || ||| | || || ||||| | |||||||| ||||| || ||||| Sbjct 7126 ATTTGGAAAATTAGCAGAAATAGCCGGAGAATATTTACGAAAAGGCTCTCAAGTATATAT 7185 Query 38433 TGAAGGCCAGCTTG-AAACTAAGAAGTGGCGGGATCAAAGCGGTCAGGACCGATACACAA 38491 |||||| |||||| | |||| || |||| || |||| ||||| || ||| | | Sbjct 7186 TGAAGG-AAGCTTGCAGACTAGAAAATGGCAAGACCAAAATGGTCAAGATAAATATATCA 7244 Query 38492 TAGGCATTGTGGTTCAGGGTTACAATGGTGTAATGCAAATGCTTGGTAGCAAAC 38545 || ||| | || ||| | |||||| |||||||||||||| | |||| Sbjct 7245 CAGAAATTATTGT--AGGAAT-TAATGGTTCTATGCAAATGCTTGGAACAAAAC 7295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132896476064772