Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_026014.1 Length=35814 Score E Sequences producing significant alignments: (Bits) Value seq367 174 4e-39 >seq367 Length=84945 Score = 174 bits (192), Expect = 4e-39 Identities = 274/386 (71%), Gaps = 6/386 (2%) Strand=Plus/Plus Query 26983 ATTGGCTATGTAAGGGTATCAACAAATGACCAGAATACAGACCTGCAACGAAACGCTCTT 27042 || |||||| | ||||| |||| |||||| || || || || | || ||||| | ||| Sbjct 11719 ATAGGCTATATGAGGGTGTCAAAAAATGAACAAAACACCGATTTACAGCGAAAATCACTT 11778 Query 27043 GTTTGTGCAGGATGTGAACAAATATTTGAAGATAAATTAAGCGGGACAA-AGA-CAGACC 27100 ||||| || ||||| || || ||||| |||||| | ||||| | || ||| |||| Sbjct 11779 ATTTGTACAAATTGTGAGCAGATTTTTGAGGATAAAATCAGCGGAAAAACAGATCAGA-- 11836 Query 27101 GACCGGGATTAAAACGCGCTTTAAAGCGCCTTCAAAAAGGTGACACGCTGGTTGTCTGGA 27160 |||| ||||||||||||| |||| || || |||||||| | | ||||||| Sbjct 11837 GACCCAGATTAAAACGCGCGCTAAATGCACTGAAATCGGGTGACACCTTAATCGTCTGGA 11896 Query 27161 AACTGGATCGCCTCGGGCGAAGCATGAAACATCTGATTTCTCTCGTCGGGGAACTACGGG 27220 | |||||| | || || || ||||| |||||| ||||| || | | |||| | Sbjct 11897 AGCTGGATAGACTGGGTCGCAGCATTAAACATTTGATTACTTTAATATCCAAACTGGAAG 11956 Query 27221 AGCGAGGGATTAATTTTCGCAGTCTGACCGACAGCATAGATACATCTTC-TCCAATGGGG 27279 | ||| ||| |||||| ||| |||| || ||| ||||| ||| | ||| | || Sbjct 11957 ATGAAGGTATTCATTTTCATAGTTTGACGGATGCCATTGATACCTCTACGTCCGCT-GGC 12015 Query 27280 CGTTTTTTCTTCCACGTGATGGGTGCCCTGGCTGAAATGGAACGTGAATTAATTGTTGAA 27339 ||||||||||| || |||||| |||| |||| ||||||| || ||| | |||||||| Sbjct 12016 CGTTTTTTCTTTCATGTGATGAGTGCGTTGGCGCAAATGGAGCGGGAACTCATTGTTGAG 12075 Query 27340 CGTACACTGGCCGGACTGGCAGCAGC 27365 ||||| ||| || | || ||||| Sbjct 12076 CGTACTAAGGCAGGTTTAGCCGCAGC 12101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114480853523712