Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq32 123 2e-23 seq116 89.7 5e-13 >seq32 Length=1919080 Score = 123 bits (136), Expect = 2e-23 Identities = 169/234 (72%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 ||| ||||| | ||||||||||| |||| || || | ||||| | || |||||| | Sbjct 39423 CAATATGCAGATTTTTGTAAAAACCCTAACGGGCAAGACCATCACTCTTGAGGTCGAACC 39364 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 | || |||||||| | |||||| || ||| || |||||||| || || ||||| Sbjct 39363 CTCGGACACTATCGAAAATGTAAAAGCCAAGATTCAGGACAAAGAGGGAATTCCACCCGA 39304 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAATGTCAGCGAT 25348 |||||| || | |||| || || || ||| | ||||||| | | |||| |||| Sbjct 39303 CCAGCAACGATTGATTTTCGCTGGAAAGCAATTGGAAGATGGCCGCACATTGTC--CGAT 39246 Query 25349 TACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGA 25402 || ||||||||||||||||||||| | ||| | ||| | | ||| |||| ||| Sbjct 39245 TATAATATTCAAAAAGAATCCACCTTACATCTTGTGCTGCGTTTGCGAGGTGGA 39192 >seq116 Length=862150 Score = 89.7 bits (98), Expect = 5e-13 Identities = 112/151 (74%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231 || |||||| | ||||||||||||||||| || ||| | || || | ||||| ||| || Sbjct 474102 AAAATGCAAATCTTTGTAAAAACATTAACTGGCAAAACTATTACTTTGGAAGTTGAA-CC 474160 Query 25232 AAC-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 | | ||||||||||| | || ||| |||||| ||||| || ||||| || || || Sbjct 474161 ATCGGATACTATCGAAAATGTTAAAGCTAAAATTCAAGATAAGGAAGGTATTCCCCCAGA 474220 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAA 25321 ||||||| | | |||| | ||||| ||| Sbjct 474221 TCAGCAACGTTTGATTTTTGCTGGCAAGCAA 474251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445084797088320