Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq32 123 2e-23
seq116 89.7 5e-13
>seq32
Length=1919080
Score = 123 bits (136), Expect = 2e-23
Identities = 169/234 (72%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230
||| ||||| | ||||||||||| |||| || || | ||||| | || |||||| |
Sbjct 39423 CAATATGCAGATTTTTGTAAAAACCCTAACGGGCAAGACCATCACTCTTGAGGTCGAACC 39364
Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290
| || |||||||| | |||||| || ||| || |||||||| || || |||||
Sbjct 39363 CTCGGACACTATCGAAAATGTAAAAGCCAAGATTCAGGACAAAGAGGGAATTCCACCCGA 39304
Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAATGTCAGCGAT 25348
|||||| || | |||| || || || ||| | ||||||| | | |||| ||||
Sbjct 39303 CCAGCAACGATTGATTTTCGCTGGAAAGCAATTGGAAGATGGCCGCACATTGTC--CGAT 39246
Query 25349 TACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGA 25402
|| ||||||||||||||||||||| | ||| | ||| | | ||| |||| |||
Sbjct 39245 TATAATATTCAAAAAGAATCCACCTTACATCTTGTGCTGCGTTTGCGAGGTGGA 39192
>seq116
Length=862150
Score = 89.7 bits (98), Expect = 5e-13
Identities = 112/151 (74%), Gaps = 2/151 (1%)
Strand=Plus/Plus
Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231
|| |||||| | ||||||||||||||||| || ||| | || || | ||||| ||| ||
Sbjct 474102 AAAATGCAAATCTTTGTAAAAACATTAACTGGCAAAACTATTACTTTGGAAGTTGAA-CC 474160
Query 25232 AAC-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290
| | ||||||||||| | || ||| |||||| ||||| || ||||| || || ||
Sbjct 474161 ATCGGATACTATCGAAAATGTTAAAGCTAAAATTCAAGATAAGGAAGGTATTCCCCCAGA 474220
Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAA 25321
||||||| | | |||| | ||||| |||
Sbjct 474221 TCAGCAACGTTTGATTTTTGCTGGCAAGCAA 474251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445084797088320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |