Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq116 152 5e-32
>seq116
Length=862150
Score = 152 bits (168), Expect = 5e-32
Identities = 165/216 (76%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583
||||||||| || | ||| |||||||| ||||||||||| | ||| || || | ||
Sbjct 484298 CAACACCAAGTGAAGAGTAGATTCCTTTTGTATGTTGTAATCAGACAATGTGCGGCCATC 484239
Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643
|||| ||| || || ||||| ||||| ||||||||||| | ||||| | ||||||||
Sbjct 484238 TTCCAACTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATACCTTCCTTGTC 484179
Query 35644 CATGATCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCG 35702
| ||| |||||||| | ||| | | ||||| || ||| || |||| |||||||
Sbjct 484178 CTGGAT-TTTTGCTTTAACGTTTTCGATAGTGTCTGACGGTTCTACTTCCAAAGTGATCG 484120
Query 35703 TTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
|||| || ||||||||||| |||||||| |||||||
Sbjct 484119 TTTTTCCGGTCAAAGTTTTAACAAATATTTGCATTC 484084
Score = 111 bits (122), Expect = 1e-19
Identities = 116/151 (77%), Gaps = 1/151 (1%)
Strand=Plus/Minus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
||||||| || | | |||||||||||| || || |||||||| ||||||||||| |
Sbjct 484086 TTCCACCGCGGAGACGCAACACCAAATGCAATGTGGATTCCTTTTGTATGTTGTAATCAG 484027
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
||| || || | || |||| ||| || || ||||| ||||| ||||||||||| | ||
Sbjct 484026 ACAATGTGCGGCCATCTTCCAACTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAG 483967
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTT 35658
||| | ||||||||| ||| ||||||||
Sbjct 483966 GAATACCTTCCTTGTCCTGGAT-TTTTGCTT 483937
Score = 91.5 bits (100), Expect = 1e-13
Identities = 99/129 (77%), Gaps = 2/129 (2%)
Strand=Plus/Minus
Query 35609 AACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCC 35668
|| ||||||||||| | ||||| | ||||||||| ||| |||||||| | ||| |
Sbjct 482010 AAACGCTGCTGGTCTGGAGGAATACCTTCCTTGTCCTGGAT-TTTTGCTTTAACGTTTTC 481952
Query 35669 -ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727
| || || ||||| ||||||| ||||| |||||||| ||||||||||| |||||
Sbjct 481951 GATAGTATCTGATGATTCTACCTCCAAAGTGATGGTTTTACCGGTCAAAGTTTTAACAAA 481892
Query 35728 TATCTGCAT 35736
||| |||||
Sbjct 481891 TATTTGCAT 481883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450783874128080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |