Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq74 98.7 1e-15 >seq74 Length=1239978 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/222 (70%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 161473 TGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGAT 161532 ||| ||| | || || || || ||||| ||||| ||||| | ||| || ||||| || || Sbjct 496684 TGGAATTTTGTTTAATCACGAATCACCGCGACGTGGTGAAAATTTTGTGACCCGCAAAAT 496743 Query 161533 TACTAGGGGACTATCCCGTATTAGTACAGGA--CTACAGGATTGTCTATACCTAGGTAAT 161590 |||| | || || ||| || || | | ||| ||| | | | || ||| Sbjct 496744 TACTCGTTCCGTAGCCAAAATT--TATTTGAACCAATTGGAATGTTTTGAATTGGGCAAT 496801 Query 161591 CTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGATG 161650 || |||||| ||| |||||||||||||| || ||||| || || |||||| ||||| Sbjct 496802 CTCGACTCAAAACGTGATTGGGGTCATGCCATGGATTATGTAGAAGCCATGTGGATGATG 496861 Query 161651 TTACAACAGGAAACTCCTGATGACTATGTGATTGCCACAGGT 161692 ||||||| || || ||| || ||||||||||| || ||| Sbjct 496862 TTACAACGTGACACACCTTCCGATTATGTGATTGCTACGGGT 496903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729913851768880