Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_027382.1 Length=37146 Score E Sequences producing significant alignments: (Bits) Value seq367 165 2e-36 >seq367 Length=84945 Score = 165 bits (182), Expect = 2e-36 Identities = 290/416 (70%), Gaps = 6/416 (1%) Strand=Plus/Plus Query 35527 ATTGGCTATGTAAGGGTATCAACAAATGACCAGAATACAGACCTGCAACGAAACGCTCTT 35586 || |||||| | ||||| |||| |||||| || || || || | || ||||| | ||| Sbjct 11719 ATAGGCTATATGAGGGTGTCAAAAAATGAACAAAACACCGATTTACAGCGAAAATCACTT 11778 Query 35587 GTTTGTGCAGGATGTGAACAAATATTTGAAGATAAATTAAGCGGAACAAG-GA-CAGACA 35644 ||||| || ||||| || || ||||| |||||| | ||||||| || || |||| Sbjct 11779 ATTTGTACAAATTGTGAGCAGATTTTTGAGGATAAAATCAGCGGAAAAACAGATCAGA-- 11836 Query 35645 GACCTGGATTAAAACGCGCTTTAAAGCGTCTTCAAAAAGGTGACACACTGGTTGTCTGGA 35704 |||| ||||||||||||| |||| || || |||||||| | | ||||||| Sbjct 11837 GACCCAGATTAAAACGCGCGCTAAATGCACTGAAATCGGGTGACACCTTAATCGTCTGGA 11896 Query 35705 AACTGGATCGCCTCGGGCGAAGCATGAAACATTTGATTTCTCTCGTAGGGGAATTACGAG 35764 | |||||| | || || || ||||| |||||||||||| || | || || | || Sbjct 11897 AGCTGGATAGACTGGGTCGCAGCATTAAACATTTGATTACTTTAATATCCAAACTGGAAG 11956 Query 35765 AGCGAGGGATTAATTTTCGCAGTCTTACTGACAGTATTGATACGTC-ATCTCCAATGGGG 35823 | ||| ||| |||||| ||| | || || |||||||| || | ||| | || Sbjct 11957 ATGAAGGTATTCATTTTCATAGTTTGACGGATGCCATTGATACCTCTACGTCCGCT-GGC 12015 Query 35824 CGTTTTTTCTTCCACGTTATGGGTGCCCTGGCTGAGATGGAACGAGAACTAATCATCGAG 35883 ||||||||||| || || ||| |||| |||| | ||||| || ||||| || | ||| Sbjct 12016 CGTTTTTTCTTTCATGTGATGAGTGCGTTGGCGCAAATGGAGCGGGAACTCATTGTTGAG 12075 Query 35884 AGAACGATGGCTGGACTTGCTGCTGCCAGAAATAAAGGCCGTATCGGTGGGCGACC 35939 | || | ||| || | || || || |||| | || |||||||| || |||| Sbjct 12076 CGTACTAAGGCAGGTTTAGCCGCAGCAAGAAGCAGGGGACGTATCGGGGGTAGACC 12131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118743166160496