Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_027382.1
Length=37146
Score E
Sequences producing significant alignments: (Bits) Value
seq367 165 2e-36
>seq367
Length=84945
Score = 165 bits (182), Expect = 2e-36
Identities = 290/416 (70%), Gaps = 6/416 (1%)
Strand=Plus/Plus
Query 35527 ATTGGCTATGTAAGGGTATCAACAAATGACCAGAATACAGACCTGCAACGAAACGCTCTT 35586
|| |||||| | ||||| |||| |||||| || || || || | || ||||| | |||
Sbjct 11719 ATAGGCTATATGAGGGTGTCAAAAAATGAACAAAACACCGATTTACAGCGAAAATCACTT 11778
Query 35587 GTTTGTGCAGGATGTGAACAAATATTTGAAGATAAATTAAGCGGAACAAG-GA-CAGACA 35644
||||| || ||||| || || ||||| |||||| | ||||||| || || ||||
Sbjct 11779 ATTTGTACAAATTGTGAGCAGATTTTTGAGGATAAAATCAGCGGAAAAACAGATCAGA-- 11836
Query 35645 GACCTGGATTAAAACGCGCTTTAAAGCGTCTTCAAAAAGGTGACACACTGGTTGTCTGGA 35704
|||| ||||||||||||| |||| || || |||||||| | | |||||||
Sbjct 11837 GACCCAGATTAAAACGCGCGCTAAATGCACTGAAATCGGGTGACACCTTAATCGTCTGGA 11896
Query 35705 AACTGGATCGCCTCGGGCGAAGCATGAAACATTTGATTTCTCTCGTAGGGGAATTACGAG 35764
| |||||| | || || || ||||| |||||||||||| || | || || | ||
Sbjct 11897 AGCTGGATAGACTGGGTCGCAGCATTAAACATTTGATTACTTTAATATCCAAACTGGAAG 11956
Query 35765 AGCGAGGGATTAATTTTCGCAGTCTTACTGACAGTATTGATACGTC-ATCTCCAATGGGG 35823
| ||| ||| |||||| ||| | || || |||||||| || | ||| | ||
Sbjct 11957 ATGAAGGTATTCATTTTCATAGTTTGACGGATGCCATTGATACCTCTACGTCCGCT-GGC 12015
Query 35824 CGTTTTTTCTTCCACGTTATGGGTGCCCTGGCTGAGATGGAACGAGAACTAATCATCGAG 35883
||||||||||| || || ||| |||| |||| | ||||| || ||||| || | |||
Sbjct 12016 CGTTTTTTCTTTCATGTGATGAGTGCGTTGGCGCAAATGGAGCGGGAACTCATTGTTGAG 12075
Query 35884 AGAACGATGGCTGGACTTGCTGCTGCCAGAAATAAAGGCCGTATCGGTGGGCGACC 35939
| || | ||| || | || || || |||| | || |||||||| || ||||
Sbjct 12076 CGTACTAAGGCAGGTTTAGCCGCAGCAAGAAGCAGGGGACGTATCGGGGGTAGACC 12131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 118743166160496
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |