Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_027984.1 Length=57677 Score E Sequences producing significant alignments: (Bits) Value seq985 109 2e-19 seq429 80.6 1e-10 >seq985 Length=1952 Score = 109 bits (120), Expect = 2e-19 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 21679 GGCCCTTTAGCTCAGTGGTGAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTTCAAAT 21738 ||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||| Sbjct 1752 GGCCCTTTAGCTCAGTGGTAAGAGCAGGCGACTCATAATCGCTTGGTCGCTGGTTCAAAT 1811 Query 21739 CCAGCAAGGGCCA 21751 ||||||||||||| Sbjct 1812 CCAGCAAGGGCCA 1824 >seq429 Length=112147 Score = 80.6 bits (88), Expect = 1e-10 Identities = 150/211 (71%), Gaps = 12/211 (6%) Strand=Plus/Plus Query 18288 GCTATATTCCTCACGCGCCAGCAAAATCTGGCGTCGGGATTAGCACCCCGGATATCGAA- 18346 |||||| || ||| || ||||| || || |||||| || ||||||| |||| || Sbjct 6206 GCTATAGTCAATCCGCACCTGCAAATTCAGGTGTCGGGTTTGAGACCCCGGTTATCTAAG 6265 Query 18347 ACGGTGCATAAC-CGCGCTG-GCGG---TTTTTTATGCGCTAAGCACAGTCACATTCGCG 18401 | || ||||||| ||| | ||| ||||||||||| | || | | || || | Sbjct 6266 AAGGCGCATAACACGCCGAGAGCGTGTTTTTTTTATGCG-TCAGTCC-GCCATATCAG-- 6321 Query 18402 ATTTATGGCGGGCTGTGTGGGGGAGCCGAAAGGCTCGCCGGATGTTTC--GACCGGTAGT 18459 | | |||| |||||| ||||||||||| |||||||||||| | ||| |||||||| Sbjct 6322 AATAATGGTGGGCTGGATGGGGGAGCCGCAAGGCTCGCCGGGTCCTTCTTAGCCGGTAGT 6381 Query 18460 GCTAACCCCGCACAGTTCGCCACCACGATGA 18490 ||||| | ||| ||||||||| |||| Sbjct 6382 CTCAACCCTGTTCAGCTCGCCACCAATATGA 6412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184441019573268