Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq245 95.1 1e-14 >seq245 Length=384531 Score = 95.1 bits (104), Expect = 1e-14 Identities = 127/174 (73%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 179064 ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATATT 179123 ||||||||| || | | || || ||||||||||| | |||||| | ||||| ||||| Sbjct 259148 ATCTTTGCCGCCAGTTAAGCGGGTACCAAATTGACCTCTTGGCTCCAACAGATTTATATT 259207 Query 179124 GTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGT-ATCCGCGAGGGAGACTTCAC 179182 || ||||||| || | | ||||| |||| || || || || | || ||||||| Sbjct 259208 ATTCGAACCCACATAATTTTGTGCCAAACTGACTATGGTCATTTGC-AAAGACACTTCAC 259266 Query 179183 CGTGATGGTAAGCCGACTTGTCCGCCACATATGCCGCCAACTGCGCCACCTTCA 179236 ||||||| ||||| ||| | |||||||| || | | || ||||| || |||| Sbjct 259267 CGTGATGATAAGCGGACATTTCCGCCACGGATCCAGATAATTGCGCAACTTTCA 259320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618421857260560