Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq162 86.0 7e-12
>seq162
Length=626193
Score = 86.0 bits (94), Expect = 7e-12
Identities = 220/330 (67%), Gaps = 5/330 (2%)
Strand=Plus/Plus
Query 104915 GAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAG 104974
||||| || || || ||||||||||||||||| || ||||| | || ||||||||| ||
Sbjct 499869 GAGACCGGAACTCCTTACATGCTTTACAAAGATGCTTGTAATCGCAAAAGTAATCAACAG 499928
Query 104975 AATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAA 105034
||| | || || || | || | |||||||||||| | |||| |||
Sbjct 499929 AATGTTGGCACTATAAAATGCAGTAACTTGTGTACAGAAATCGTCGAATATACGTCGGCT 499988
Query 105035 GATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAG 105094
|| || | || || || || | |||||||| || | | || ||| | | | ||
Sbjct 499989 GAAGAAATAGCAGTTTGCAATTTAGCATCAATTGCGTTGAATATGTTTGT--AACGACAG 500046
Query 105095 ACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTA 105154
| ||| | || ||||| | | |||||| | |||||| | || | | || || |||||
Sbjct 500047 ATAAACA-ATATGATTTTCACAAACTCAAAGAAGTTGCAAAGCTTATAACAAAGAACCTC 500105
Query 105155 AACAGAGTTATTGATAGAAATTTTTACCCCGTTG-AGACTGCTCGTAAATCTAATATGAG 105213
|||| | | || |||| |||| || |||||| | | | || |||||| | |
Sbjct 500106 AACAAAATAATCGATATCAATTACTA-TCCGTTGCCGGAAACCAGAAAGTCTAATTTTCG 500164
Query 105214 ACACCGTCCAATTGGTCTCGGTGTTCAGGG 105243
|| |||||||||||| | || || || ||
Sbjct 500165 TCATCGTCCAATTGGTTTAGGCGTCCAAGG 500194
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583248216148240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |