Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq162 86.0 7e-12 >seq162 Length=626193 Score = 86.0 bits (94), Expect = 7e-12 Identities = 220/330 (67%), Gaps = 5/330 (2%) Strand=Plus/Plus Query 104915 GAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAG 104974 ||||| || || || ||||||||||||||||| || ||||| | || ||||||||| || Sbjct 499869 GAGACCGGAACTCCTTACATGCTTTACAAAGATGCTTGTAATCGCAAAAGTAATCAACAG 499928 Query 104975 AATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAA 105034 ||| | || || || | || | |||||||||||| | |||| ||| Sbjct 499929 AATGTTGGCACTATAAAATGCAGTAACTTGTGTACAGAAATCGTCGAATATACGTCGGCT 499988 Query 105035 GATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAG 105094 || || | || || || || | |||||||| || | | || ||| | | | || Sbjct 499989 GAAGAAATAGCAGTTTGCAATTTAGCATCAATTGCGTTGAATATGTTTGT--AACGACAG 500046 Query 105095 ACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTA 105154 | ||| | || ||||| | | |||||| | |||||| | || | | || || ||||| Sbjct 500047 ATAAACA-ATATGATTTTCACAAACTCAAAGAAGTTGCAAAGCTTATAACAAAGAACCTC 500105 Query 105155 AACAGAGTTATTGATAGAAATTTTTACCCCGTTG-AGACTGCTCGTAAATCTAATATGAG 105213 |||| | | || |||| |||| || |||||| | | | || |||||| | | Sbjct 500106 AACAAAATAATCGATATCAATTACTA-TCCGTTGCCGGAAACCAGAAAGTCTAATTTTCG 500164 Query 105214 ACACCGTCCAATTGGTCTCGGTGTTCAGGG 105243 || |||||||||||| | || || || || Sbjct 500165 TCATCGTCCAATTGGTTTAGGCGTCCAAGG 500194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583248216148240