Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_028685.1
Length=62851
Score E
Sequences producing significant alignments: (Bits) Value
seq170 208 3e-49
>seq170
Length=159274
Score = 208 bits (230), Expect = 3e-49
Identities = 437/647 (68%), Gaps = 6/647 (1%)
Strand=Plus/Plus
Query 21056 ATGCGGGTGATGTTTGTCTGTCCGTACACCATCCTGCTGAACCAGACAGCGGAACGTTTC 21115
||||| || ||||||||| || | |||| | ||||| | || |||||| || ||
Sbjct 158509 ATGCGTGTCATGTTTGTCGCCCCATTCACCGTGCTGCTTGATCAAACAGCGACGCGCTTT 158568
Query 21116 ACCGAATACGGTTTGCCGTGGGAAGAAATCAGTTTTGTATGGCGTGATCACCCTAACTAT 21175
|| ||||| ||||| || |||||||| | ||| || ||||| || || ||
Sbjct 158569 GTTGAGTACGGCTTGCCTGCTGATGAAATCAGCTATGTGTGACGTGACCATCCATTGCAT 158628
Query 21176 GACCCGTCACGACTGATTCAGATTGCCAGTGCCGACACGCTGATCCGTCGTGAGTTTCCT 21235
|||||| |||||| |||||||||||||||||||||||||| ||||| |||| ||
Sbjct 158629 GACCCGGATAAACTGATCCAGATTGCCAGTGCCGACACGCTGATACGTCGGCAGTTCCCG 158688
Query 21236 GACAACATCGATCTGCTGATCATCGATGAAGCACACATGAAGCGTCGTGCGTTACTTGAG 21295
| ||| || ||| || |||| | || ||||| || ||| || | || ||
Sbjct 158689 GGCAATATTGATTTGTTGATTGTTGACGAAGCCCATATGCGCCGCAAAAAACTGCTGGAA 158748
Query 21296 GTTATCCGGGACAGAGACATCAGGGTTCTTGGACTTTCCGGCACCCCGTTCGCAGCCTGG 21355
| |||||||| | || |||||||| | || || || || || | ||||||| | |||
Sbjct 158749 ATCATCCGGGATACTGATATCAGGGTGGTGGGGCTATCGGGTACGCTGTTCGCATCATGG 158808
Query 21356 ATGGGGAAGTACTACGAATGCCTGATCAAGCCTACAACGATTCGTGAACTTATTCAGCGT 21415
||||| || |||||||| || || || ||||| || || || || || || | |
Sbjct 158809 ATGGGAAAATACTACGAGAAGCTCATTAAACCTACCACAATGCGCGAGCTGATAAGACTT 158868
Query 21416 GGTGATCTGAGCGATTACGAGTTTTTTGCCCCCTCAATGCCTGATCTGGCTGGCGTAAA- 21474
|| ||| | ||| || ||||| | || || ||| ||| || |||| ||
Sbjct 158869 GGGGATTTAAGCCCGTATGAGTTCTACGCACCTGATCGGCCCGATGTGAGCAGCGTCAAG 158928
Query 21475 --AACCAGTAACACCGTATTTGGACGGGATTACAACGAGGAGCAGCTCGCATCCATCATG 21532
| ||| | | | | ||| | ||| |||||||||||||| || || |||||||
Sbjct 158929 ACATCCAATCTGGCTGCCTATGGGCAGGACTACAACGAGGAGCAACTGGCTGTCATCATG 158988
Query 21533 GG-GAGTTCGGATCTGGTTGGCGATATCGTTCGCAACTGGCTTGAGAATGGCGAGGATTT 21591
|| || | | ||||| || | || || ||||||||||| || || ||||| ||
Sbjct 158989 GGAGACGCCACGT-TGGTT-GCAACATTGTACGCAACTGGCTGGAAAACGGCGAAGACAG 159046
Query 21592 GCCGACGATCTGCTTTTGCGTGAATGTTGCGCATGCGAATTTTGTTACCCGTGAGTTTTT 21651
|| ||| ||||||||||||| || || ||||| || | ||| || || ||||| |
Sbjct 159047 ACCAACGGTCTGCTTTTGCGTCAACGTCAGTCATGCTAACTATGTCACACGACAGTTTAT 159106
Query 21652 ACAGGCCGGTATTGGCGCAGAGGTGATGACGGCAGATACCCTCCATG 21698
| | ||| | || || ||||||||||| || |||| ||||
Sbjct 159107 AAAATTCGGCGTCAATGCTGAAGTGATGACGGCTGACACCCCACATG 159153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 200994171873032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |