Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_028855.1 Length=44846 Score E Sequences producing significant alignments: (Bits) Value seq748 82.4 2e-11 >seq748 Length=7821 Score = 82.4 bits (90), Expect = 2e-11 Identities = 178/261 (68%), Gaps = 4/261 (2%) Strand=Plus/Minus Query 30240 AACTGTTCCAACCTCACCATCACGCGCTTTAGCCACAATTATTTCGGCGATACCCTG-AT 30298 || |||||| | | ||||| ||| ||| | | ||| ||||| || || || | | Sbjct 6812 AATTGTTCCTATCGGACCATTACGTTGTTTTCCTAAAATAATTTCTGCTATTCCTTTTAA 6753 Query 30299 CTTTTGAGTTTTTATCATAATACT-CATCACGATATATAAACATGATCACATCTGCGTCC 30357 || |||| |||| || ||| |||| |||| ||||| |||||||| || |||||||| || Sbjct 6752 CTCTTGA-TTTTCATTATA-TACTTCATCTCGATAAATAAACATAATTACATCTGCATCT 6695 Query 30358 TCTTCAATAGATCCCGACTCACGAATGTCAGACATTAGAGGTCGTCTATCTTTTCTAGAT 30417 | ||| || ||||| || || | | || || | | |||| | ||||| || Sbjct 6694 TGTTCGATCGATCCAGATTCCCTTAAATCTGAATTGATCGGTCTTTTATCTGATCGCTGC 6635 Query 30418 TCTAAGCTTCGGCTTAATTGCGCTAAACAAAAAACAGGACAATCAAATTCTTTTGCTATA 30477 ||||| || || | | ||| | ||| || ||||||| | || ||||||||||| Sbjct 6634 TCTAAACTACGATTAAGTTGTGATAATGCAATAACAGGAACTTGAAGTTCTTTTGCTAAT 6575 Query 30478 GCCTTAAGACCTTTTGATATT 30498 || || | | | |||||||| Sbjct 6574 GCTTTTAAAGATCTTGATATT 6554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143382661132896