Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_028943.1
Length=29237
Score E
Sequences producing significant alignments: (Bits) Value
seq367 143 5e-30
>seq367
Length=84945
Score = 143 bits (158), Expect = 5e-30
Identities = 287/418 (69%), Gaps = 12/418 (3%)
Strand=Plus/Plus
Query 21862 ATTGGCTATGTACGCGTGTCAACAAATGACCAGAACACGGAATTGCAGCGTAACGCGCTG 21921
|| |||||| | | ||||||| |||||| || ||||| || || ||||| || | ||
Sbjct 11719 ATAGGCTATATGAGGGTGTCAAAAAATGAACAAAACACCGATTTACAGCGAAAATCACTT 11778
Query 21922 GAGTGCGCAGGATGTGAGCTGATTTTTGAGGATAAAATCAGCGGCACTA-AG-TCCGACC 21979
|| || ||||||| |||||||||||||||||||||||| | | || || ||
Sbjct 11779 ATTTGTACAAATTGTGAGCAGATTTTTGAGGATAAAATCAGCGGAAAAACAGATCAGA-- 11836
Query 21980 GACCGGGACTGAAAAAACTGCTCAGGACATT---ATCGGAGGGGGATACACTGGTGGTCT 22036
|||| || | ||| ||| | || | ||||| | || || | | ||||
Sbjct 11837 GACCCAGATTAAAACGCGCGCTAAATGCACTGAAATCGG---GTGACACCTTAATCGTCT 11893
Query 22037 GGAAGCTGGACAGGCTGGGGCGTAATATGCGGCATCTGGTCATTCTGGTTGAGGAACTGC 22096
|||||||||| || ||||| || | || ||| || | | | | | |||||
Sbjct 11894 GGAAGCTGGATAGACTGGGTCGCAGCATTAAACATTTGATTACTTTAATATCCAAACTGG 11953
Query 22097 GCGAACGCGGCGTTAATTTTCGCAGCCTGACGGATGCTATTGATACCAGCACG-CCGATG 22155
|| || || |||||| || |||||||||| ||||||||| ||| ||| ||
Sbjct 11954 AAGATGAAGGTATTCATTTTCATAGTTTGACGGATGCCATTGATACCTCTACGTCCGCTG 12013
Query 22156 GGGCGTTTTTTCTTTCATGTGATGGGTGCCCTGGCTGAAATGGAACGAGAACTCATTGTC 22215
| ||||||||||||||||||||| |||| |||| ||||||| || |||||||||||
Sbjct 12014 GC-CGTTTTTTCTTTCATGTGATGAGTGCGTTGGCGCAAATGGAGCGGGAACTCATTGTT 12072
Query 22216 GAGCGGACTCGGGCCGGGCTGGAAGCGGCCAGAGCCAAAGGTCGTATTGGTGGCAGAC 22273
||||| ||| ||| || | | || || ||| || || ||||| || || ||||
Sbjct 12073 GAGCGTACTAAGGCAGGTTTAGCCGCAGCAAGAAGCAGGGGACGTATCGGGGGTAGAC 12130
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 93434884895988
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |