Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq298 104 7e-18 >seq298 Length=289783 Score = 104 bits (114), Expect = 7e-18 Identities = 155/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 31268 CCGAGCAGTTCCAGGTTCTTCACCTTGTCCGGCCATTTGATCTTCTTGAGGATTCCGACC 31327 || ||||| ||||||||||| |||||||||||||||||||| || || | || || | Sbjct 269575 CCTAGCAGCTCCAGGTTCTTTACCTTGTCCGGCCATTTGATTTTTTTCAAAATACCAATG 269516 Query 31328 GCCGCGCGGGAGTCGCCCTTGCCCTCGAACATCTCGGCCAGGTCGAAGCCGCTGAGGTAC 31387 || | || | ||||| ||||||| ||||||||||||| || | ||| || || || Sbjct 269515 GCATCACGCGCCTCGCCTCTGCCCTCAAACATCTCGGCCAAATCAACGCCACTCAGATAG 269456 Query 31388 TGGCGCCAGGCCTTGGGCCACTGGCTCAGCGGGCGCAGGGTCAGGTCATCATTGACAATG 31447 |||||||||| ||||| | ||| || | | | ||| || || | | |||| Sbjct 269455 CGGCGCCAGGCGGCCGGCCATTCCGCCAGGGGCCTGACGCGCAGCTCTTCGTCAAGAATG 269396 Query 31448 TCCAGGAGGTCCATCTGATCGATCTCCTCCAGGCGCCGGA 31487 ||| | ||||| | ||||| ||| ||| ||| ||| Sbjct 269395 TCCGCCACATCCATGTTGTCGATTTCCAGCAGACGCTGGA 269356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160460711089740