Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_030929.1 Length=49033 Score E Sequences producing significant alignments: (Bits) Value seq298 80.6 8e-11 >seq298 Length=289783 Score = 80.6 bits (88), Expect = 8e-11 Identities = 136/193 (70%), Gaps = 8/193 (4%) Strand=Plus/Plus Query 9019 AAATGGAAAGGCAGCGTCGAGGACGGCATTGCCCACCTTCGCAGCTATGTCGAG---ATC 9075 |||||| ||||||||||||||||| |||||| |||| || | | ||||| ||| Sbjct 270651 AAATGGCCGGGCAGCGTCGAGGACGGGATTGCCTACCTGCGGGGGT---TCGAGCATATC 270707 Query 9076 GTGATCCATGAGCGATGCACGAAAACCCTCCGCGAGGCCAGGCTATACAGCTACAAGGTA 9135 || || ||| || || || | ||| | | || || |||| || |||||||| Sbjct 270708 GTTATTCATCGTCGTTGTGCGCATACCGTACAGGAAGCGCGGCTGTATTCGTACAAGGTC 270767 Query 9136 GACCGGCAGACCGGGGATGTGCTTACCGAT-ATCGTCGACAAGAACAACCACTACTGGGA 9194 |||||||| ||| || ||| || ||| | | || || || ||||||| | |||||| Sbjct 270768 GACCGGCAAACCCATGAGGTG-TTGCCGGTGTTGGTGGATAAACACAACCATTGCTGGGA 270826 Query 9195 CGCCACACGCTAC 9207 ||||| |||||| Sbjct 270827 CGCCATCCGCTAC 270839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156780786515940