Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_031077.1 Length=41760 Score E Sequences producing significant alignments: (Bits) Value seq1715 122 2e-23 >seq1715 Length=1042 Score = 122 bits (134), Expect = 2e-23 Identities = 183/260 (70%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 19782 GTTGATGATGTCGTTAAGATTGCCCAGGGTATCCCGCTTAATGCTGTAGAAGGAAAATAC 19841 |||||||| | | |||| | |||||||||||||| || || || || || || Sbjct 1042 GTTGATGACGCCATTAAACTGTTGCAGGGTATCCCGCTCAACGCGGTCGAGGGTAAGCCG 983 Query 19842 GAACAAACTGGCGGTGATCTGGTGAAACTTGGCAAAGGACTGACGCCTGGCGCGAATATC 19901 |||||||| || || ||||| || || ||| ||| || ||| || || ||| | Sbjct 982 GAACAAACCGGGGGCGATCTCGTCAAGTTTGCCAAGGGCATGATCCCAGGGCAAAATTTA 923 Query 19902 TGGTATCTCAAAGCCGCCATAGATCACATGATCTTCAACCAGATGCAGGAGTATTTTTCT 19961 |||||| |||||| | | || || ||| |||| || ||| | ||||| ||||| Sbjct 922 TGGTATACCAAAGCGGTGCTTGACCATATGGTCTTTAATCAGCTACAGGAAATCTTTTCA 863 Query 19962 CCTGGCTATCTGCGTAAGATGGAACAACGTTCGAAGAAAGAATTTAACCAGACATACTGG 20021 || || ||| | || |||||| | ||||| |||||| ||||| || || |||||| Sbjct 862 CCGGGGTATTTACGCCGAATGGAAAAGCGTTCCCGGAAAGAGTTTAATCAAACCTACTGG 803 Query 20022 TGGCGGCCGCAGGACACGCT 20041 ||||| |||||||||| ||| Sbjct 802 TGGCGTCCGCAGGACAGGCT 783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133507663537464