Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_031081.1
Length=45206
Score E
Sequences producing significant alignments: (Bits) Value
seq429 102 2e-17
>seq429
Length=112147
Score = 102 bits (112), Expect = 2e-17
Identities = 176/252 (70%), Gaps = 8/252 (3%)
Strand=Plus/Plus
Query 6085 TGTTTGCACACCCGGC-ATCGGCGGGCCACGGCCTTAACTTGCAGGACGGCGGTCATCAC 6143
|||| || ||||| || | || ||||| |||| || ||| | |||||||||||| || |
Sbjct 10451 TGTTCGCCCACCCCGCCAGCGCCGGGC-ACGGGCTGAACCTTCAGGACGGCGGTAATGTC 10509
Query 6144 CTGGCAATCTTCTCCGATACCTGGAACTTTGAGCACTTTTCGCAGATCGTTGAGCGTATC 6203
|||| | |||||| | ||| | ||||||| | |||||| | ||||| |||
Sbjct 10510 CTGGTGTTTTTCTCCCACTGGTGGGGCCTTGAGCAGTACCAGCAGATTATCGAGCGCATC 10569
Query 6204 GGGCCGGTTCGCCAGATGCAGGCCGGGCACCCTCGACCGGTATTCGT---CTACATTATC 6260
|| ||| || ||| |||||||||||||| || ||||||||| | | ||||| ||
Sbjct 10570 GGCCCGACCCGACAGGCTCAGGCCGGGCACCCGCGCCCGGTATTCATTCACCACATTGTC 10629
Query 6261 CAGGCGCGCGGGACACTGGACGAACTGGTCGCGGAGCGTCGCGACAGTAAGCGAGACATT 6320
|| || || | || ||||||||| |||||| |||||| ||||| | |
Sbjct 10630 ---GCCACCGATACCGTCGATGAACTGGTCATGGAGCGACGCGACTCAAAGCGTCAGGTG 10686
Query 6321 CAGGACGATTTA 6332
|||||| ||||
Sbjct 10687 CAGGACATTTTA 10698
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 144534637521216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |