Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_031081.1 Length=45206 Score E Sequences producing significant alignments: (Bits) Value seq429 102 2e-17 >seq429 Length=112147 Score = 102 bits (112), Expect = 2e-17 Identities = 176/252 (70%), Gaps = 8/252 (3%) Strand=Plus/Plus Query 6085 TGTTTGCACACCCGGC-ATCGGCGGGCCACGGCCTTAACTTGCAGGACGGCGGTCATCAC 6143 |||| || ||||| || | || ||||| |||| || ||| | |||||||||||| || | Sbjct 10451 TGTTCGCCCACCCCGCCAGCGCCGGGC-ACGGGCTGAACCTTCAGGACGGCGGTAATGTC 10509 Query 6144 CTGGCAATCTTCTCCGATACCTGGAACTTTGAGCACTTTTCGCAGATCGTTGAGCGTATC 6203 |||| | |||||| | ||| | ||||||| | |||||| | ||||| ||| Sbjct 10510 CTGGTGTTTTTCTCCCACTGGTGGGGCCTTGAGCAGTACCAGCAGATTATCGAGCGCATC 10569 Query 6204 GGGCCGGTTCGCCAGATGCAGGCCGGGCACCCTCGACCGGTATTCGT---CTACATTATC 6260 || ||| || ||| |||||||||||||| || ||||||||| | | ||||| || Sbjct 10570 GGCCCGACCCGACAGGCTCAGGCCGGGCACCCGCGCCCGGTATTCATTCACCACATTGTC 10629 Query 6261 CAGGCGCGCGGGACACTGGACGAACTGGTCGCGGAGCGTCGCGACAGTAAGCGAGACATT 6320 || || || | || ||||||||| |||||| |||||| ||||| | | Sbjct 10630 ---GCCACCGATACCGTCGATGAACTGGTCATGGAGCGACGCGACTCAAAGCGTCAGGTG 10686 Query 6321 CAGGACGATTTA 6332 |||||| |||| Sbjct 10687 CAGGACATTTTA 10698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144534637521216