Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_031113.1 Length=44513 Score E Sequences producing significant alignments: (Bits) Value seq429 91.5 4e-14 >seq429 Length=112147 Score = 91.5 bits (100), Expect = 4e-14 Identities = 168/245 (69%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 3744 GTCCTGAATATCCCGCTTACTGTCGCGACGCTCGGCGACCAGTTCGTCCAGTGTTCCGCG 3803 |||||| | | ||||| |||||| ||||| ||||||||| || | || || Sbjct 10692 GTCCTGCACCTGACGCTTTGAGTCGCGTCGCTCCATGACCAGTTCATCGACGGTATCGGT 10633 Query 3804 CGCCTGGATAATGTAG---ACGAATACCGGTCGAGGGTGCCCGGCCTGCATCTGGCGAAC 3860 || || ||||| | | ||||||||| || |||||||||||||| ||| || Sbjct 10632 GGC---GACAATGTGGTGAATGAATACCGGGCGCGGGTGCCCGGCCTGAGCCTGTCGGGT 10576 Query 3861 CGGCCCGATACGCTCAACGATCTGCGAAAAGTGCTCAAAGTTCCAGGTATCGGAGAAGAT 3920 ||| ||||| ||||| | |||||| | ||||||| | ||| | |||||| | Sbjct 10575 CGGGCCGATGCGCTCGATAATCTGCTGGTACTGCTCAAGGCCCCACCAGTGGGAGAAAAA 10516 Query 3921 TGCCAGGTGATGACCGCCGTCCTGCAAGTTAAGGCCGTGGCCTGCCGATGCCGGGTGTGC 3980 ||||| || |||||||||||| | ||| || ||||| || || || ||||| || Sbjct 10515 CACCAGGACATTACCGCCGTCCTGAAGGTTCAGCCCGTGCCCGGCGCTGGCGGGGTGGGC 10456 Query 3981 AAACA 3985 |||| Sbjct 10455 GAACA 10451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142317082973700