Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_031117.1 Length=44885 Score E Sequences producing significant alignments: (Bits) Value seq748 84.2 6e-12 >seq748 Length=7821 Score = 84.2 bits (92), Expect = 6e-12 Identities = 176/257 (68%), Gaps = 4/257 (2%) Strand=Plus/Plus Query 32329 AATATCAAAAGGCCTTAAAGCTATAGCAAAAGAATTTGATTGTCCTGTTTTTTGTTTAGC 32388 |||||||| | | ||||| ||||||||||| || | ||||||| || ||| | Sbjct 6554 AATATCAAGATCTTTAAAAGCATTAGCAAAAGAACTTCAAGTTCCTGTTATTGCATTATC 6613 Query 32389 GCAATTAAGCCGAAGCTTAGAATCCAGAAAAGATAGACGACCTCTAATGTCTGACATTCG 32448 ||| | | || || ||||| || ||||| | |||| | | || || | | Sbjct 6614 ACAACTTAATCGTAGTTTAGAGCAGCGATCAGATAAAAGACCGATCAATTCAGATTTAAG 6673 Query 32449 TGAGTCGGGATCTATTGAAGAGGACGCAGATGTGATCATGTTTATATATCGTGATG-AGT 32507 || || ||||| || ||| | || |||||||| || |||||||| ||||| |||| ||| Sbjct 6674 GGAATCTGGATCGATCGAACAAGATGCAGATGTAATTATGTTTATTTATCGAGATGAAGT 6733 Query 32508 ATTATGATAAAAACTCAA-AGGATCAAGGTATTGCTGAAATAATTGTAGCTAAAGCGCGT 32566 | ||| || |||| |||| || |||| || || ||||| ||| ||| ||| ||| Sbjct 6734 A-TATAATGAAAA-TCAAGAGTTAAAAGGAATAGCAGAAATTATTTTAGGAAAACAACGT 6791 Query 32567 GATGGTGAGGTTGGAAC 32583 ||||| | | ||||| Sbjct 6792 AATGGTCCGATAGGAAC 6808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143507458574964