Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq512 273 2e-68 seq109 98.7 1e-15 >seq512 Length=181763 Score = 273 bits (302), Expect = 2e-68 Identities = 476/691 (69%), Gaps = 6/691 (1%) Strand=Plus/Minus Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402 ||| || ||| |||| ||||||| |||||| || ||| || || |||| | || Sbjct 52825 ATCGGCAACATATTCTATATATTTACACATACTTTCGCTGTTCATGCCAATTAAGTCGAC 52766 Query 23403 TGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAAC 23462 ||| | || || || || ||||||||| || |||||| | ||||| | | Sbjct 52765 TGGTAAGGCTTCTGTCAAAAACTCTTTTTCAATTTTCACGGCATCTGTTATTATCTCCAA 52706 Query 23463 AATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACA 23522 ||| ||||| ||| ||| | | |||||| ||||||| ||| ||||| ||||| Sbjct 52705 AATCCGTTCTTTACTCGGTTTTTGTATTAAATGTTTAAACATTAATACCGCAAATTCACA 52646 Query 23523 ATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCC 23582 |||| ||||||||| | |||| ||||||||| |||||||| |||||||||| ||| Sbjct 52645 GTGTAAGCCTTCATCGCGTGATATCATTTCATTAGAGAATGTTAAACCTGGCATTATTCC 52586 Query 23583 TCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGC 23642 ||||| || | ||||||||| | || || || |||||||||||| || || || Sbjct 52585 ACGTTTCTTTAGCCAAAATATCGATGCGAAGCTGCCACTAAAGAAAATACCTTCGACGGC 52526 Query 23643 CGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGT 23702 || || || | | |||| |||||| | || || || |||||| | | Sbjct 52525 AGCGAAAGCTATGACACGTTCACCAAAATTAGCTGAATGCGATGATATCCATGCTAGAGC 52466 Query 23703 CCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTT 23762 ||| | |||||| || || | ||||| ||||| || || || ||| | Sbjct 52465 CCATTCCGCCTTCTTCTTAACCAATGGCATTGTCTCAATAGCATTAAATAGATATTCACG 52406 Query 23763 TTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATT 23822 ||||| | ||| | |||||||| || || ||||||||||||||||| || || | ||| Sbjct 52405 TTCTTTCTCATCCATGATATATGTTTCGATAAGTAAACTATACATTTCCGAGTGCACATT 52346 Query 23823 TTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAA 23882 ||| || ||||| ||||| |||||||| || | |||||||| | |||||| || | | Sbjct 52345 TTCCATGGCAATTTGAAAACCATAAAAGCAACGAGCTTCAGTTATTTGAACCTCTTGGGA 52286 Query 23883 AAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAAC 23942 ||||| || ||||||| || |||||||||||||| || ||||| ||||| | || Sbjct 52285 AAATCGTTCCACTAAATTCTCATTAACAATACCATCGGATGCCGCAAAAAAAGCCAAGAC 52226 Query 23943 ATATTTTATAAAATGTCTTT---CATCAGTTGATAATTTTTTCCAATCATTAATATCTTT 23999 || | |||||||| | || | ||| | ||| |||||||| | || ||||| Sbjct 52225 ATGTGAAATAAAATGACGTTCGCCGTCACT---TAACCGATTCCAATCGTCCATGTCTTT 52169 Query 24000 TGATAAATCAACTTCATCAACTGTCCAAAAA 24030 || | ||||| || ||| | ||||||||| Sbjct 52168 AGAGAGGTCAACCTCTTCAGCAGTCCAAAAA 52138 >seq109 Length=951561 Score = 98.7 bits (108), Expect = 1e-15 Identities = 83/102 (81%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 139428 AGGTGTCCTACATACAAAATTTTGGATTGTTGATAATAAACATATATATATTGGAAGTGC 139487 ||| ||| ||||||||||||| ||| |||| |||||||| ||| | ||| | |||||||| Sbjct 940987 AGGAGTCTTACATACAAAATTATGGGTTGTAGATAATAAGCATTTTTATTTGGGAAGTGC 940928 Query 139488 TAACATGGACTGGCGATCACTAACTCAAGTAAAAGAATTAGG 139529 || ||||||||| | || | |||||||| ||||| ||||| Sbjct 940927 AAATATGGACTGGAGGTCTTTGACTCAAGTCAAAGAGTTAGG 940886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521476748896400