Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq512 273 2e-68
seq109 98.7 1e-15
>seq512
Length=181763
Score = 273 bits (302), Expect = 2e-68
Identities = 476/691 (69%), Gaps = 6/691 (1%)
Strand=Plus/Minus
Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402
||| || ||| |||| ||||||| |||||| || ||| || || |||| | ||
Sbjct 52825 ATCGGCAACATATTCTATATATTTACACATACTTTCGCTGTTCATGCCAATTAAGTCGAC 52766
Query 23403 TGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAAC 23462
||| | || || || || ||||||||| || |||||| | ||||| | |
Sbjct 52765 TGGTAAGGCTTCTGTCAAAAACTCTTTTTCAATTTTCACGGCATCTGTTATTATCTCCAA 52706
Query 23463 AATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACA 23522
||| ||||| ||| ||| | | |||||| ||||||| ||| ||||| |||||
Sbjct 52705 AATCCGTTCTTTACTCGGTTTTTGTATTAAATGTTTAAACATTAATACCGCAAATTCACA 52646
Query 23523 ATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCC 23582
|||| ||||||||| | |||| ||||||||| |||||||| |||||||||| |||
Sbjct 52645 GTGTAAGCCTTCATCGCGTGATATCATTTCATTAGAGAATGTTAAACCTGGCATTATTCC 52586
Query 23583 TCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGC 23642
||||| || | ||||||||| | || || || |||||||||||| || || ||
Sbjct 52585 ACGTTTCTTTAGCCAAAATATCGATGCGAAGCTGCCACTAAAGAAAATACCTTCGACGGC 52526
Query 23643 CGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGT 23702
|| || || | | |||| |||||| | || || || |||||| | |
Sbjct 52525 AGCGAAAGCTATGACACGTTCACCAAAATTAGCTGAATGCGATGATATCCATGCTAGAGC 52466
Query 23703 CCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTT 23762
||| | |||||| || || | ||||| ||||| || || || ||| |
Sbjct 52465 CCATTCCGCCTTCTTCTTAACCAATGGCATTGTCTCAATAGCATTAAATAGATATTCACG 52406
Query 23763 TTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATT 23822
||||| | ||| | |||||||| || || ||||||||||||||||| || || | |||
Sbjct 52405 TTCTTTCTCATCCATGATATATGTTTCGATAAGTAAACTATACATTTCCGAGTGCACATT 52346
Query 23823 TTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAA 23882
||| || ||||| ||||| |||||||| || | |||||||| | |||||| || | |
Sbjct 52345 TTCCATGGCAATTTGAAAACCATAAAAGCAACGAGCTTCAGTTATTTGAACCTCTTGGGA 52286
Query 23883 AAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAAC 23942
||||| || ||||||| || |||||||||||||| || ||||| ||||| | ||
Sbjct 52285 AAATCGTTCCACTAAATTCTCATTAACAATACCATCGGATGCCGCAAAAAAAGCCAAGAC 52226
Query 23943 ATATTTTATAAAATGTCTTT---CATCAGTTGATAATTTTTTCCAATCATTAATATCTTT 23999
|| | |||||||| | || | ||| | ||| |||||||| | || |||||
Sbjct 52225 ATGTGAAATAAAATGACGTTCGCCGTCACT---TAACCGATTCCAATCGTCCATGTCTTT 52169
Query 24000 TGATAAATCAACTTCATCAACTGTCCAAAAA 24030
|| | ||||| || ||| | |||||||||
Sbjct 52168 AGAGAGGTCAACCTCTTCAGCAGTCCAAAAA 52138
>seq109
Length=951561
Score = 98.7 bits (108), Expect = 1e-15
Identities = 83/102 (81%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 139428 AGGTGTCCTACATACAAAATTTTGGATTGTTGATAATAAACATATATATATTGGAAGTGC 139487
||| ||| ||||||||||||| ||| |||| |||||||| ||| | ||| | ||||||||
Sbjct 940987 AGGAGTCTTACATACAAAATTATGGGTTGTAGATAATAAGCATTTTTATTTGGGAAGTGC 940928
Query 139488 TAACATGGACTGGCGATCACTAACTCAAGTAAAAGAATTAGG 139529
|| ||||||||| | || | |||||||| ||||| |||||
Sbjct 940927 AAATATGGACTGGAGGTCTTTGACTCAAGTCAAAGAGTTAGG 940886
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521476748896400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |