Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq248 125 1e-23 >seq248 Length=388190 Score = 125 bits (138), Expect = 1e-23 Identities = 201/286 (70%), Gaps = 6/286 (2%) Strand=Plus/Minus Query 156165 AACAATCGTCTGACGTTAGCTTCCGATTCACCCACATATTTGTTTAATAATTCAGGACCG 156224 ||||| ||||| | |||||||| ||||| || |||||||| | ||||| || ||| || Sbjct 208120 AACAACCGTCTTATATTAGCTTCGGATTCGCCAACATATTTATCTAATACTTGAGGGCCA 208061 Query 156225 TTAACTATTTTGACGGGTCGTGA---TTTAAAAGCTTGAGCGATACAGCGAGCCATTAAT 156281 || || ||||| || || || || || | ||| | || ||||||||| || Sbjct 208060 TTTACAATTTTT--GGTTCACGAGCATTCAACATATTGC-CTATTTGGCGAGCCATCAAG 208004 Query 156282 GTTTTACCGCACCCAGGAGGTCCGTATAACAATACTCCTTTTATATGTTTACAACCTAAT 156341 ||||||||| ||||||||||| || | ||| | ||||| | ||| || ||||| | Sbjct 208003 GTTTTACCGGTACCAGGAGGTCCATACAGCAAAATACCTTTGACATGCTTGCAACCCAGC 207944 Query 156342 TTTTCAGTTATTTCTACCGGAACTGATCTGGAAGCAAATGCTCTTCGAAAAATGAGAGAA 156401 | |||| | ||| |||| ||| |||||||| || | || ||||| | Sbjct 207943 TGTTCAACCACTTCGGGAGGAAAGACTCTTGAAGCAAAAGCACGACGGAAAATAGCATTG 207884 Query 156402 AATTCTTTATCCAATCCCCCCACACCCATTTCCTCAAAATTCCAAT 156447 |||||||||||||| || || | |||||||| |||||| ||||| Sbjct 207883 AATTCTTTATCCAAGCCGCCGATACCCATTTTGCCAAAATCCCAAT 207838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667060807852560